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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   107061198   pentatricopeptide repeat-containing protein At1g50270 
 sly-u.5   101253949   pentatricopeptide repeat-containing protein At1g50270 
 nta-r.1   107790084   pentatricopeptide repeat-containing protein At1g50270-like 
 nta-r.1   107800534   pentatricopeptide repeat-containing protein At1g50270-like 
 ath-u.5   AT1G50270   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100819113   pentatricopeptide repeat-containing protein At1g50270 
 mtr-u.5   25492816   pentatricopeptide repeat-containing protein At1g50270 
 ghi-r.1   107903942   pentatricopeptide repeat-containing protein At1g50270 
 ghi-r.1   107955710   pentatricopeptide repeat-containing protein At1g50270 

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Top 50 coexpressed genes to 107061198 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107061198 (sot-r.1 coexpression data)

CoexMap"107061198"


sotLOC107061198 | Entrez gene ID : 107061198      
Species sot sly nta ath gma mtr ghi hvu vvi bdi osa tae bna ppo zma cre sbi bra cit
Paralog 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_015165518.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_015165518.1)
Subcellular
localization
TargetP
other 2  (predict for XP_015165518.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
107061198
sly-u.5
for
101253949
nta-r.1
for
107790084
nta-r.1
for
107800534
ath-u.5
for
AT1G50270
gma-u.5
for
100819113
mtr-u.5
for
25492816
ghi-r.1
for
107903942
ghi-r.1
for
107955710


Ortholog ID: 15241
Species sot sly nta nta ath gma mtr ghi ghi
Symbol LOC107061198 LOC101253949 LOC107790084 LOC107800534 AT1G50270 LOC100819113 LOC25492816 LOC107903942 LOC107955710
Function* pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270-like pentatricopeptide repeat-containing protein At1g50270-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107061198 101253949 107790084 107800534 841449 100819113 25492816 107903942 107955710
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