Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G50270   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.7   AT1G50270   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   AT1G50270   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   AT1G50270   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   AT1G50270   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   AT1G50270   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   AT1G50270   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   AT1G50270   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   AT1G50270   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100819113   pentatricopeptide repeat-containing protein At1g50270 
 mtr-u.5   25492816   pentatricopeptide repeat-containing protein At1g50270 
 sly-u.5   101253949   pentatricopeptide repeat-containing protein At1g50270 

close


Top 50 coexpressed genes to AT1G50270 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT1G50270 (ath-u.5 coexpression data)

CoexMap"841449"


athAT1G50270 | Entrez gene ID : 841449      
Species ath gma mtr sly ppo hvu osa sot vvi tae nta bra cit ghi zma bna bdi sbi cre
Paralog 9 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1764 genes)  IEA  
Protein NP_175445.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 1,  nucl 1,  vacu 1,  nucl_plas 1,  E.R._vacu 1  (predict for NP_175445.1)
Subcellular
localization
TargetP
other 6  (predict for NP_175445.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G50270

.
ath-r.7
for
AT1G50270

.
ath-m.9
for
AT1G50270

.
ath-e.2
for
AT1G50270

.
ath-m.4.bio
for
AT1G50270

.
ath-m.4.hor
for
AT1G50270

.
ath-m.4.lig
for
AT1G50270

.
ath-m.4.str
for
AT1G50270

.
ath-m.4.tis
for
AT1G50270

.
gma-u.5
for
100819113

.
mtr-u.5
for
25492816

.
sly-u.5
for
101253949

.


Ortholog ID: 15241
Species ath gma sly mtr ghi ghi sot nta nta
Symbol AT1G50270 LOC100819113 LOC101253949 LOC25492816 LOC107903942 LOC107955710 LOC107061198 LOC107790084 LOC107800534
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270-like pentatricopeptide repeat-containing protein At1g50270-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841449 100819113 101253949 25492816 107903942 107955710 107061198 107790084 107800534
The preparation time of this page was 0.2 [sec].