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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25501237   choline transporter protein 1 
 mtr-r.5   25501237   choline transporter protein 1 
 mtr-u.5   25487357   choline transporter protein 1 
 gma-u.5   100815939   choline transporter protein 1 
 gma-u.5   100779959   choline transporter protein 1 
 gma-u.5   100803501   choline transporter protein 1 
 ppo-u.5   7460829   choline transporter protein 1 
 ath-u.5   AT3G15380   Plasma-membrane choline transporter family protein 
 vvi-u.5   100241764   choline transporter protein 1 
 sly-u.5   101253105   choline transporter protein 1 
 osa-u.5   4337433   choline transporter protein 1 
 osa-u.5   4337431   choline transporter protein 1 
 zma-u.5   103645752   choline transporter protein 1 
 zma-u.5   103654439   choline transporter protein 1 

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Top 50 coexpressed genes to 25501237 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25501237 (mtr-u.5 coexpression data)

CoexMap"25501237"


mtrLOC25501237 | Entrez gene ID : 25501237      
Species mtr gma ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 3 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0055085 [list] [network] transmembrane transport  (1131 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (3455 genes)  IEA  
GO MF
GO:0022857 [list] [network] transmembrane transporter activity  (1347 genes)  IEA  
Protein XP_013445405.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  E.R. 1  (predict for XP_013445405.1)
Subcellular
localization
TargetP
other 9  (predict for XP_013445405.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25501237

.
mtr-r.5
for
25501237

.
mtr-u.5
for
25487357

.
gma-u.5
for
100815939

.
gma-u.5
for
100779959

.
gma-u.5
for
100803501

.
ppo-u.5
for
7460829

.
ath-u.5
for
AT3G15380

.
vvi-u.5
for
100241764

.
sly-u.5
for
101253105

.
osa-u.5
for
4337433

.
osa-u.5
for
4337431

.
zma-u.5
for
103645752

.
zma-u.5
for
103654439

.


Ortholog ID: 4546
Species ath gma gma sly osa osa zma zma bra bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta nta
Symbol AT3G15380 LOC100815939 LOC100803501 LOC101253105 LOC4337431 LOC4337433 LOC103654439 LOC103645752 LOC103859621 LOC103869923 LOC100241764 LOC7460829 LOC25501237 LOC25487357 LOC123047450 LOC123191084 LOC123428446 LOC123409855 LOC107917955 LOC107929789 LOC106401142 LOC106406034 CHLRE_01g021500v5 LOC8064313 LOC8076480 LOC102586600 LOC102619733 LOC100828458 LOC100821830 LOC107803658 LOC107804771
Function* Plasma-membrane choline transporter family protein choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1-like choline transporter protein 1-like choline transporter protein 1 choline transporter protein 1 choline transporter protein 1-like choline transporter protein 1 uncharacterized protein choline transporter protein 1 choline transporter protein 1 choline transporter-like protein 2 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00460 Cyanoamino acid metabolism 2
gma00500 Starch and sucrose metabolism 2
gma00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04016 MAPK signaling pathway - plant 2
cre04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00460 Cyanoamino acid metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00460 Cyanoamino acid metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820777 100815939 100803501 101253105 4337431 4337433 103654439 103645752 103859621 103869923 100241764 7460829 25501237 25487357 123047450 123191084 123428446 123409855 107917955 107929789 106401142 106406034 5715212 8064313 8076480 102586600 102619733 100828458 100821830 107803658 107804771
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