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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g021500v5   uncharacterized protein 
 ath-u.5   AT3G15380   Plasma-membrane choline transporter family protein 
 gma-u.5   100815939   choline transporter protein 1 
 gma-u.5   100779959   choline transporter protein 1 
 gma-u.5   100803501   choline transporter protein 1 
 sly-u.5   101253105   choline transporter protein 1 
 osa-u.5   4337433   choline transporter protein 1 
 osa-u.5   4337431   choline transporter protein 1 
 zma-u.5   103645752   choline transporter protein 1 
 zma-u.5   103654439   choline transporter protein 1 
 bra-r.6   103859621   choline transporter protein 1 
 bra-r.6   103869923   choline transporter protein 1 
 vvi-u.5   100241764   choline transporter protein 1 
 ppo-u.5   7460829   choline transporter protein 1 
 mtr-u.5   25487357   choline transporter protein 1 
 mtr-u.5   25501237   choline transporter protein 1 
 tae-r.2   123164302   choline transporter protein 1 
 tae-r.2   123191084   choline transporter protein 1 
 tae-r.2   123055251   choline transporter protein 1 
 hvu-r.1   123428446   choline transporter protein 1-like 
 hvu-r.1   123409855   choline transporter protein 1-like 
 ghi-r.1   107929789   choline transporter protein 1 
 ghi-r.1   107955678   choline transporter protein 1 
 ghi-r.1   107917955   choline transporter protein 1 
 bna-r.1   106439411   choline transporter protein 1 
 bna-r.1   106406034   choline transporter protein 1 
 sbi-r.1   8064313   choline transporter protein 1 
 sbi-r.1   8076480   choline transporter protein 1 
 sot-r.1   102586600   choline transporter-like protein 2 
 cit-r.1   102619733   choline transporter protein 1 
 bdi-r.1   100828458   choline transporter protein 1 
 bdi-r.1   100821830   choline transporter protein 1 
 nta-r.1   107803658   choline transporter protein 1 
 nta-r.1   107804771   choline transporter protein 1 

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Top 50 coexpressed genes to CHLRE_01g021500v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g021500v5 (cre-r.1 coexpression data)

CoexMap"5715212"


creCHLRE_01g021500v5 | Entrez gene ID : 5715212      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 3 1 2 2 2 1 1 2 3 2 3 2 2 1 1 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0055085 [list] [network] transmembrane transport  (461 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (1543 genes)  IEA  
GO MF
GO:0022857 [list] [network] transmembrane transporter activity  (567 genes)  IEA  
Protein XP_001689518.2 [sequence] [blastp]
Subcellular
localization
wolf
vacu 4,  plas 3,  golg 1,  nucl_plas 1,  cysk_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_001689518.2)
Subcellular
localization
TargetP
other 9,  mito 3  (predict for XP_001689518.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g021500v5
ath-u.5
for
AT3G15380
gma-u.5
for
100815939
gma-u.5
for
100779959
gma-u.5
for
100803501
sly-u.5
for
101253105
osa-u.5
for
4337433
osa-u.5
for
4337431
zma-u.5
for
103645752
zma-u.5
for
103654439
bra-r.6
for
103859621
bra-r.6
for
103869923
vvi-u.5
for
100241764
ppo-u.5
for
7460829
mtr-u.5
for
25487357
mtr-u.5
for
25501237
tae-r.2
for
123164302
tae-r.2
for
123191084
tae-r.2
for
123055251
hvu-r.1
for
123428446
hvu-r.1
for
123409855
ghi-r.1
for
107929789
ghi-r.1
for
107955678
ghi-r.1
for
107917955
bna-r.1
for
106439411
bna-r.1
for
106406034
sbi-r.1
for
8064313
sbi-r.1
for
8076480
sot-r.1
for
102586600
cit-r.1
for
102619733
bdi-r.1
for
100828458
bdi-r.1
for
100821830
nta-r.1
for
107803658
nta-r.1
for
107804771


Ortholog ID: 4546
Species cre ath gma gma gma sly osa osa zma zma bra bra vvi ppo mtr mtr tae tae tae hvu hvu ghi ghi ghi bna bna sbi sbi sot cit bdi bdi nta nta
Symbol CHLRE_01g021500v5 AT3G15380 LOC100815939 LOC100779959 LOC100803501 LOC101253105 LOC4337433 LOC4337431 LOC103645752 LOC103654439 LOC103859621 LOC103869923 LOC100241764 LOC7460829 LOC25487357 LOC25501237 LOC123191084 LOC123047450 LOC123160396 LOC123428446 LOC123409855 LOC107929789 LOC107917955 LOC107917771 LOC106406034 LOC106401142 LOC8064313 LOC8076480 LOC102586600 LOC102619733 LOC100828458 LOC100821830 LOC107803658 LOC107804771
Function* uncharacterized protein Plasma-membrane choline transporter family protein choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1-like choline transporter protein 1-like choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1-like choline transporter protein 1 choline transporter protein 1 choline transporter-like protein 2 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1 choline transporter protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04016 MAPK signaling pathway - plant 2
cre04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00460 Cyanoamino acid metabolism 2
gma00500 Starch and sucrose metabolism 2
gma00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00460 Cyanoamino acid metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00460 Cyanoamino acid metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5715212 820777 100815939 100779959 100803501 101253105 4337433 4337431 103645752 103654439 103859621 103869923 100241764 7460829 25487357 25501237 123191084 123047450 123160396 123428446 123409855 107929789 107917955 107917771 106406034 106401142 8064313 8076480 102586600 102619733 100828458 100821830 107803658 107804771
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