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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-m.8   4336879   growth-regulating factor 3-like 
 osa-u.5   4336879   growth-regulating factor 3-like 
 osa-r.6   4336879   growth-regulating factor 3-like 
 osa-e.1   4336879   growth-regulating factor 3-like 
 osa-u.5   4330436   growth-regulating factor 4-like 
 tae-r.2   123088276   growth-regulating factor 5 
 tae-r.2   123054413   growth-regulating factor 3 
 tae-r.2   123046556   growth-regulating factor 3 
 hvu-r.1   123404808   growth-regulating factor 4-like 
 hvu-r.1   123403172   growth-regulating factor 1-like 
 bdi-r.1   100845697   growth-regulating factor 1 
 bdi-r.1   100842886   growth-regulating factor 5 
 bdi-r.1   100835287   growth-regulating factor 2 
 zma-u.5   100101543   uncharacterized LOC100101543 
 zma-u.5   100125644   Growth-regulating factor 6 
 zma-u.5   100125641   growth-regulating factor 7-like 
 sbi-r.1   8073168   growth-regulating factor 4 
 sbi-r.1   8072276   growth-regulating factor 3 
 sbi-r.1   8070748   growth-regulating factor 2 
 ath-u.5   GRF5   growth-regulating factor 5 
 gma-u.5   GRF15   growth-regulating factor 
 gma-u.5   GRF13   growth-regulating factor 
 gma-u.5   GRF11   growth-regulating factor 
 sly-u.5   101245679   growth-regulating factor 4-like 
 sly-u.5   101255511   growth-regulating factor 6-like 
 sly-u.5   101263989   growth-regulating factor 4 
 bra-r.6   103870079   growth-regulating factor 5 
 vvi-u.5   100247998   growth-regulating factor 1 
 vvi-u.5   100259737   growth-regulating factor 4 
 ppo-u.5   18104178   growth-regulating factor 4 
 mtr-u.5   25494182   growth-regulating factor 1 
 mtr-u.5   25486490   growth-regulating factor 1 
 mtr-u.5   11429462   growth-regulating factor 5 
 ghi-r.1   107958784   growth-regulating factor 1 
 ghi-r.1   107893357   growth-regulating factor 6 
 ghi-r.1   107897434   growth-regulating factor 5 
 bna-r.1   106389165   growth-regulating factor 5-like 
 bna-r.1   106381127   growth-regulating factor 5-like 
 sot-r.1   102580024   growth-regulating factor 4-like 
 sot-r.1   102584254   growth-regulating factor 4-like 
 sot-r.1   102591630   growth-regulating factor 4-like 
 cit-r.1   102627866   growth-regulating factor 4-like 
 cit-r.1   107177665   growth-regulating factor 5 
 cit-r.1   102611455   growth-regulating factor 4-like 
 nta-r.1   107782296   growth-regulating factor 4-like 
 nta-r.1   107774428   growth-regulating factor 1-like 
 nta-r.1   107772772   growth-regulating factor 3-like 

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Top 50 coexpressed genes to 4336879 (osa-m.8 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4336879 (osa-m.8 coexpression data)

CoexMap"4336879"


osaLOC4336879 | Entrez gene ID : 4336879      
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 5 3 2 3 3 3 1 3 3 1 2 1 3 3 2 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (227 genes)  IEA  
GO:0032502 [list] [network] developmental process  (419 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1615 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3003 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (2335 genes)  IEA  
Protein NP_001406765.1 [sequence] [blastp]
NP_001406766.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001406765.1)
nucl 9  (predict for NP_001406766.1)
Subcellular
localization
TargetP
other 2  (predict for NP_001406765.1)
other 2  (predict for NP_001406766.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-m.8
for
4336879
osa-u.5
for
4336879
osa-r.6
for
4336879
osa-e.1
for
4336879
osa-u.5
for
4330436
tae-r.2
for
123088276
tae-r.2
for
123054413
tae-r.2
for
123046556
hvu-r.1
for
123404808
hvu-r.1
for
123403172
bdi-r.1
for
100845697
bdi-r.1
for
100842886
bdi-r.1
for
100835287
zma-u.5
for
100101543
zma-u.5
for
100125644
zma-u.5
for
100125641
sbi-r.1
for
8073168
sbi-r.1
for
8072276
sbi-r.1
for
8070748
ath-u.5
for
GRF5
gma-u.5
for
GRF15
gma-u.5
for
GRF13
gma-u.5
for
GRF11
sly-u.5
for
101245679
sly-u.5
for
101255511
sly-u.5
for
101263989
bra-r.6
for
103870079
vvi-u.5
for
100247998
vvi-u.5
for
100259737
ppo-u.5
for
18104178
mtr-u.5
for
25494182
mtr-u.5
for
25486490
mtr-u.5
for
11429462
ghi-r.1
for
107958784
ghi-r.1
for
107893357
ghi-r.1
for
107897434
bna-r.1
for
106389165
bna-r.1
for
106381127
sot-r.1
for
102580024
sot-r.1
for
102584254
sot-r.1
for
102591630
cit-r.1
for
102627866
cit-r.1
for
107177665
cit-r.1
for
102611455
nta-r.1
for
107782296
nta-r.1
for
107774428
nta-r.1
for
107772772


Ortholog ID: 673
Species osa osa tae tae tae hvu hvu bdi bdi bdi zma zma zma sbi sbi sbi ath gma gma gma sly sly sly bra vvi vvi ppo mtr mtr mtr ghi ghi ghi bna bna sot sot sot cit cit cit nta nta nta
Symbol LOC4330436 LOC4330903 LOC123128103 LOC123128605 LOC123166486 LOC123404808 LOC123408772 LOC100845697 LOC100842886 LOC100836260 LOC100101536 GRF1 LOC103627811 LOC8072276 LOC8070748 LOC8081935 GRF5 GRF15 GRF13 GRF11 LOC101255511 LOC101263989 LOC101267047 LOC103870079 LOC100247998 LOC100259737 LOC18094082 LOC25486490 LOC11429462 LOC25479294 LOC107958784 LOC107950614 LOC107951879 LOC106381127 LOC111207183 LOC102580024 LOC102591630 LOC102601897 LOC102627866 LOC107177665 LOC102612529 LOC107772772 LOC107821683 LOC107812877
Function* growth-regulating factor 4-like growth-regulating factor 1-like growth-regulating factor 4 growth-regulating factor 1 growth-regulating factor 5 growth-regulating factor 4-like growth-regulating factor 5-like growth-regulating factor 1 growth-regulating factor 5 growth-regulating factor 4 growth-regulating factor 3-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 3 growth-regulating factor 2 growth-regulating factor 1 growth-regulating factor 5 growth-regulating factor growth-regulating factor growth-regulating factor growth-regulating factor 6-like growth-regulating factor 4 growth-regulating factor 4-like growth-regulating factor 5 growth-regulating factor 1 growth-regulating factor 4 growth-regulating factor 4 growth-regulating factor 1 growth-regulating factor 5 growth-regulating factor 4 growth-regulating factor 1 growth-regulating factor 4 growth-regulating factor 4 growth-regulating factor 5-like growth-regulating factor 5 growth-regulating factor 4-like growth-regulating factor 4-like growth-regulating factor 1 growth-regulating factor 4-like growth-regulating factor 5 growth-regulating factor 6 growth-regulating factor 3-like growth-regulating factor 4-like growth-regulating factor 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00906 Carotenoid biosynthesis 2
hvu04070 Phosphatidylinositol signaling system 2
hvu00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00360 Phenylalanine metabolism 2
vvi00380 Tryptophan metabolism 2
vvi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00460 Cyanoamino acid metabolism 2
cit00500 Starch and sucrose metabolism 2
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4330436 4330903 123128103 123128605 123166486 123404808 123408772 100845697 100842886 100836260 100101536 100101535 103627811 8072276 8070748 8081935 820609 100781613 100787226 100787567 101255511 101263989 101267047 103870079 100247998 100259737 18094082 25486490 11429462 25479294 107958784 107950614 107951879 106381127 111207183 102580024 102591630 102601897 102627866 107177665 102612529 107772772 107821683 107812877
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