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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-m.8   4339064   ammonium transporter 2 member 1-like 
 osa-u.5   4339064   ammonium transporter 2 member 1-like 
 osa-r.6   4339064   ammonium transporter 2 member 1-like 
 osa-e.1   4339064   ammonium transporter 2 member 1-like 
 osa-u.5   4334717   ammonium transporter 3 member 2-like 
 osa-u.5   4324937   ammonium transporter 3 member 1-like 
 tae-r.2   543453   ammonium transporter 3 member 2 
 tae-r.2   123079638   ammonium transporter 2 member 3 
 hvu-r.1   123440464   ammonium transporter 3 member 1 
 hvu-r.1   123444973   ammonium transporter 2 member 1 
 hvu-r.1   123440565   ammonium transporter 2 member 3 
 bdi-r.1   100828386   ammonium transporter 2 member 1 
 zma-u.5   100279304   ammonium transporter 2 
 zma-u.5   110991263   uncharacterized LOC110991263 
 sbi-r.1   8057749   ammonium transporter 2 member 2 
 sbi-r.1   8072566   ammonium transporter 2 member 1 
 sbi-r.1   8080180   ammonium transporter 3 member 2 
 ath-u.5   AMT2   ammonium transporter 2 
 gma-u.5   AMT3.1   ammonium transporter AMT3.1 
 gma-u.5   AMT2.1   ammonium transporter AMT2.1 
 gma-u.5   AMT2.3   ammonium transporter AMT2.3 
 sly-u.5   101246876   ammonium transporter 2 
 bra-r.6   103867124   ammonium transporter 2 
 bra-r.6   103865660   ammonium transporter 2 
 vvi-u.5   100252515   ammonium transporter 3 member 1 
 vvi-u.5   100250641   ammonium transporter 2 
 vvi-u.5   100248822   ammonium transporter 3 member 3 
 ppo-u.5   18107984   ammonium transporter 3 member 1 
 ppo-u.5   7468066   ammonium transporter 2 
 mtr-u.5   25491489   ammonium transporter 2 
 mtr-u.5   11442449   ammonium transporter 3 member 1 
 mtr-u.5   11405627   ammonium transporter 2 
 ghi-r.1   107958074   ammonium transporter 2 
 ghi-r.1   107948950   ammonium transporter 2 
 ghi-r.1   107938932   ammonium transporter 2 
 bna-r.1   106406511   ammonium transporter 2 
 bna-r.1   106450947   ammonium transporter 2-like 
 bna-r.1   106447666   ammonium transporter 2 
 sot-r.1   102593437   ammonium transporter 2 
 cit-r.1   102621578   ammonium transporter 2 
 cit-r.1   102623874   ammonium transporter 3 member 1-like 
 nta-r.1   107820270   ammonium transporter 2 

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Top 50 coexpressed genes to 4339064 (osa-m.8 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4339064 (osa-m.8 coexpression data)

CoexMap"4339064"


osaLOC4339064 | Entrez gene ID : 4339064      
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 6 2 3 1 2 3 1 3 1 2 3 2 3 3 3 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0072488 [list] [network] ammonium transmembrane transport  (13 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (1164 genes)  IEA  
GO MF
GO:0008519 [list] [network] ammonium channel activity  (13 genes)  IEA  
Protein NP_001407460.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  chlo 2,  cyto 2  (predict for NP_001407460.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001407460.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-m.8
for
4339064
osa-u.5
for
4339064
osa-r.6
for
4339064
osa-e.1
for
4339064
osa-u.5
for
4334717
osa-u.5
for
4324937
tae-r.2
for
543453
tae-r.2
for
123079638
hvu-r.1
for
123440464
hvu-r.1
for
123444973
hvu-r.1
for
123440565
bdi-r.1
for
100828386
zma-u.5
for
100279304
zma-u.5
for
110991263
sbi-r.1
for
8057749
sbi-r.1
for
8072566
sbi-r.1
for
8080180
ath-u.5
for
AMT2
gma-u.5
for
AMT3.1
gma-u.5
for
AMT2.1
gma-u.5
for
AMT2.3
sly-u.5
for
101246876
bra-r.6
for
103867124
bra-r.6
for
103865660
vvi-u.5
for
100252515
vvi-u.5
for
100250641
vvi-u.5
for
100248822
ppo-u.5
for
18107984
ppo-u.5
for
7468066
mtr-u.5
for
25491489
mtr-u.5
for
11442449
mtr-u.5
for
11405627
ghi-r.1
for
107958074
ghi-r.1
for
107948950
ghi-r.1
for
107938932
bna-r.1
for
106406511
bna-r.1
for
106450947
bna-r.1
for
106447666
sot-r.1
for
102593437
cit-r.1
for
102621578
cit-r.1
for
102623874
nta-r.1
for
107820270


Ortholog ID: 1654
Species osa osa osa tae hvu hvu hvu bdi bdi zma zma zma sbi sbi sbi ath gma gma gma sly bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot cit cit nta
Symbol LOC4324937 LOC4327433 LOC4327434 LOC123059754 LOC123440464 LOC123440565 LOC123440465 LOC100834472 LOC104583779 LOC100279304 LOC110991263 LOC100304410 LOC8072566 LOC8080180 LOC8061048 AMT2 AMT3.1 AMT2.1 AMT2.3 LOC101246876 LOC103867124 LOC103865660 LOC100252515 LOC100250641 LOC100256159 LOC18107984 LOC7468066 LOC7465025 LOC25491489 LOC11442449 LOC11405627 LOC107958074 LOC107938932 LOC107896862 LOC106450947 LOC106447666 LOC106411537 LOC102593437 LOC102621578 LOC102623874 LOC107805306
Function* ammonium transporter 3 member 1-like ammonium transporter 2 member 3-like ammonium transporter 2 member 2-like ammonium transporter 2 member 1 ammonium transporter 3 member 1 ammonium transporter 2 member 3 ammonium transporter 3 member 1-like ammonium transporter 3 member 2 ammonium transporter 3 member 3 ammonium transporter 2 uncharacterized LOC110991263 Ammonium transporter 2 ammonium transporter 2 member 1 ammonium transporter 3 member 2 ammonium transporter 3 member 3 ammonium transporter 2 ammonium transporter AMT3.1 ammonium transporter AMT2.1 ammonium transporter AMT2.3 ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter 2-like ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 ammonium transporter 3 member 1-like ammonium transporter 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 2
osa00710 Carbon fixation by Calvin cycle 2
osa01200 Carbon metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00350 Tyrosine metabolism 2
osa00360 Phenylalanine metabolism 2
osa00380 Tryptophan metabolism 2
osa00901 Indole alkaloid biosynthesis 2
osa00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 4
hvu04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi02010 ABC transporters 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 4
gma04016 MAPK signaling pathway - plant 3
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00190 Oxidative phosphorylation 2
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00190 Oxidative phosphorylation 2
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 2
ghi00051 Fructose and mannose metabolism 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi00051 Fructose and mannose metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4324937 4327433 4327434 123059754 123440464 123440565 123440465 100834472 104583779 100279304 110991263 100304410 8072566 8080180 8061048 818409 100785993 100790119 100798599 101246876 103867124 103865660 100252515 100250641 100256159 18107984 7468066 7465025 25491489 11442449 11405627 107958074 107938932 107896862 106450947 106447666 106411537 102593437 102621578 102623874 107805306
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