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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11405627   ammonium transporter 2 
 mtr-r.5   11405627   ammonium transporter 2 
 mtr-m.5   11405627   ammonium transporter 2 
 mtr-u.5   25491489   ammonium transporter 2 
 mtr-u.5   11442449   ammonium transporter 3 member 1 
 gma-u.5   AMT2.1   ammonium transporter AMT2.1 
 gma-u.5   AMT2.3   ammonium transporter AMT2.3 
 gma-u.5   AMT2.2   ammonium transporter AMT2.2 
 ppo-u.5   7465025   ammonium transporter 3 member 1 
 ppo-u.5   7468066   ammonium transporter 2 
 ppo-u.5   18107984   ammonium transporter 3 member 1 
 ath-u.5   AMT2   ammonium transporter 2 
 bra-r.6   103865660   ammonium transporter 2 
 bra-r.6   103867124   ammonium transporter 2 
 vvi-u.5   100248822   ammonium transporter 3 member 3 
 vvi-u.5   100250641   ammonium transporter 2 
 ghi-r.1   107938932   ammonium transporter 2 
 ghi-r.1   107896862   ammonium transporter 3 member 1 
 ghi-r.1   107914485   ammonium transporter 3 member 1 
 bna-r.1   106406511   ammonium transporter 2 
 bna-r.1   106450947   ammonium transporter 2-like 
 bna-r.1   106447666   ammonium transporter 2 
 cit-r.1   102621578   ammonium transporter 2 
 cit-r.1   102623874   ammonium transporter 3 member 1-like 
 sly-u.5   101246876   ammonium transporter 2 
 sot-r.1   102593437   ammonium transporter 2 
 nta-r.1   107820270   ammonium transporter 2 
 osa-u.5   4324937   ammonium transporter 3 member 1-like 
 osa-u.5   4329628   ammonium transporter 3 member 3-like 
 zma-u.5   110991263   uncharacterized LOC110991263 
 zma-u.5   100304410   Ammonium transporter 2 
 zma-u.5   100279304   ammonium transporter 2 
 tae-r.2   123082745   ammonium transporter 3 member 2 
 tae-r.2   123059754   ammonium transporter 2 member 1 
 hvu-r.1   123440464   ammonium transporter 3 member 1 
 hvu-r.1   123399422   ammonium transporter 3 member 2 
 hvu-r.1   123440465   ammonium transporter 3 member 1-like 
 sbi-r.1   8062391   ammonium transporter 3 member 1 
 sbi-r.1   8080180   ammonium transporter 3 member 2 
 sbi-r.1   8057749   ammonium transporter 2 member 2 
 bdi-r.1   100834472   ammonium transporter 3 member 2 
 bdi-r.1   104583779   ammonium transporter 3 member 3 
 bdi-r.1   100828386   ammonium transporter 2 member 1 

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Top 50 coexpressed genes to 11405627 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11405627 (mtr-u.5 coexpression data)

CoexMap""


mtrLOC11405627 | Entrez gene ID : 11405627      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 3 1 2 2 3 3 2 1 1 1 2 3 2 3 3 3 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function ammonium transporter 2
KEGG
GO BP
GO:0072488 [list] [network] ammonium transmembrane transport  (11 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (861 genes)  IEA  
GO MF
GO:0008519 [list] [network] ammonium channel activity  (11 genes)  IEA  
Protein XP_003623328.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  chlo 1  (predict for XP_003623328.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003623328.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11405627
mtr-r.5
for
11405627
mtr-m.5
for
11405627
mtr-u.5
for
25491489
mtr-u.5
for
11442449
gma-u.5
for
AMT2.1
gma-u.5
for
AMT2.3
gma-u.5
for
AMT2.2
ppo-u.5
for
7465025
ppo-u.5
for
7468066
ppo-u.5
for
18107984
ath-u.5
for
AMT2
bra-r.6
for
103865660
bra-r.6
for
103867124
vvi-u.5
for
100248822
vvi-u.5
for
100250641
ghi-r.1
for
107938932
ghi-r.1
for
107896862
ghi-r.1
for
107914485
bna-r.1
for
106406511
bna-r.1
for
106450947
bna-r.1
for
106447666
cit-r.1
for
102621578
cit-r.1
for
102623874
sly-u.5
for
101246876
sot-r.1
for
102593437
nta-r.1
for
107820270
osa-u.5
for
4324937
osa-u.5
for
4329628
zma-u.5
for
110991263
zma-u.5
for
100304410
zma-u.5
for
100279304
tae-r.2
for
123082745
tae-r.2
for
123059754
hvu-r.1
for
123440464
hvu-r.1
for
123399422
hvu-r.1
for
123440465
sbi-r.1
for
8062391
sbi-r.1
for
8080180
sbi-r.1
for
8057749
bdi-r.1
for
100834472
bdi-r.1
for
104583779
bdi-r.1
for
100828386

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Ortholog ID: 1654
Species mtr mtr mtr gma gma gma ppo ppo ppo ath bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit sly sot nta osa osa osa zma zma zma tae hvu hvu hvu sbi sbi sbi bdi bdi
Symbol LOC11405627 LOC25491489 LOC11442449 AMT2.1 AMT2.3 AMT3.1 LOC7465025 LOC7468066 LOC18107984 AMT2 LOC103865660 LOC103867124 LOC100250641 LOC100252515 LOC100256159 LOC107938932 LOC107896862 LOC107958074 LOC106450947 LOC106447666 LOC106411537 LOC102621578 LOC102623874 LOC101246876 LOC102593437 LOC107805306 LOC4324937 LOC4327433 LOC4327434 LOC110991263 LOC100304410 LOC100279304 LOC123059754 LOC123440464 LOC123440465 LOC123440565 LOC8080180 LOC8072566 LOC8061048 LOC100834472 LOC104583779
Function* ammonium transporter 2 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter AMT2.1 ammonium transporter AMT2.3 ammonium transporter AMT3.1 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 2-like ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 ammonium transporter 3 member 1-like ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 ammonium transporter 3 member 1-like ammonium transporter 2 member 3-like ammonium transporter 2 member 2-like uncharacterized LOC110991263 Ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 member 1 ammonium transporter 3 member 1 ammonium transporter 3 member 1-like ammonium transporter 2 member 3 ammonium transporter 3 member 2 ammonium transporter 2 member 1 ammonium transporter 3 member 3 ammonium transporter 3 member 2 ammonium transporter 3 member 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 4
gma04016 MAPK signaling pathway - plant 3
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00190 Oxidative phosphorylation 2
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00190 Oxidative phosphorylation 2
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi00051 Fructose and mannose metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 2
ghi00051 Fructose and mannose metabolism 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 2
osa00710 Carbon fixation by Calvin cycle 2
osa01200 Carbon metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00350 Tyrosine metabolism 2
osa00360 Phenylalanine metabolism 2
osa00380 Tryptophan metabolism 2
osa00901 Indole alkaloid biosynthesis 2
osa00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 4
hvu04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi02010 ABC transporters 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11405627 25491489 11442449 100790119 100798599 100785993 7465025 7468066 18107984 818409 103865660 103867124 100250641 100252515 100256159 107938932 107896862 107958074 106450947 106447666 106411537 102621578 102623874 101246876 102593437 107805306 4324937 4327433 4327434 110991263 100304410 100279304 123059754 123440464 123440465 123440565 8080180 8072566 8061048 100834472 104583779
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