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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100834472   ammonium transporter 3 member 2 
 osa-u.5   4339064   ammonium transporter 2 member 1-like 
 osa-u.5   4334717   ammonium transporter 3 member 2-like 
 zma-u.5   110991263   uncharacterized LOC110991263 
 zma-u.5   100279304   ammonium transporter 2 
 zma-u.5   100304410   Ammonium transporter 2 
 ath-u.5   AMT2   ammonium transporter 2 
 gma-u.5   AMT3.1   ammonium transporter AMT3.1 
 gma-u.5   AMT2.1   ammonium transporter AMT2.1 
 gma-u.5   AMT2.3   ammonium transporter AMT2.3 
 sly-u.5   101246876   ammonium transporter 2 
 vvi-u.5   100256159   ammonium transporter 3 member 1 
 vvi-u.5   100252515   ammonium transporter 3 member 1 
 vvi-u.5   100250641   ammonium transporter 2 
 ppo-u.5   7468066   ammonium transporter 2 
 ppo-u.5   7465025   ammonium transporter 3 member 1 
 mtr-u.5   25491489   ammonium transporter 2 
 mtr-u.5   11405627   ammonium transporter 2 
 mtr-u.5   11442449   ammonium transporter 3 member 1 

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Top 50 coexpressed genes to 100834472 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100834472 (bdi-r.1 coexpression data)

CoexMap"100834472"


bdiLOC100834472 | Entrez gene ID : 100834472      
Species bdi osa zma ath gma sly vvi ppo mtr hvu bra cit bna sbi ghi sot nta cre tae
Paralog 1 2 3 1 3 1 3 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0072488 [list] [network] ammonium transmembrane transport  (8 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (914 genes)  IEA  
GO MF
GO:0008519 [list] [network] ammonium channel activity  (8 genes)  IEA  
Protein XP_003562803.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  cyto 1,  chlo 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1  (predict for XP_003562803.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003562803.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100834472
osa-u.5
for
4339064
osa-u.5
for
4334717
zma-u.5
for
110991263
zma-u.5
for
100279304
zma-u.5
for
100304410
ath-u.5
for
AMT2
gma-u.5
for
AMT3.1
gma-u.5
for
AMT2.1
gma-u.5
for
AMT2.3
sly-u.5
for
101246876
vvi-u.5
for
100256159
vvi-u.5
for
100252515
vvi-u.5
for
100250641
ppo-u.5
for
7468066
ppo-u.5
for
7465025
mtr-u.5
for
25491489
mtr-u.5
for
11405627
mtr-u.5
for
11442449


Ortholog ID: 1654
Species bdi tae hvu hvu osa osa zma zma sbi sbi ath gma gma sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna sot cit cit
Symbol LOC104583779 LOC123059754 LOC123440464 LOC123440465 LOC4327433 LOC4327434 LOC100279304 LOC100304410 LOC8080180 LOC8072566 AMT2 AMT3.1 AMT2.1 LOC101246876 LOC103865660 LOC103867124 LOC100250641 LOC100252515 LOC7468066 LOC7465025 LOC11442449 LOC25491489 LOC107896862 LOC107958074 LOC106450947 LOC106411537 LOC102593437 LOC102623874 LOC102621578
Function* ammonium transporter 3 member 3 ammonium transporter 2 member 1 ammonium transporter 3 member 1 ammonium transporter 3 member 1-like ammonium transporter 2 member 3-like ammonium transporter 2 member 2-like ammonium transporter 2 Ammonium transporter 2 ammonium transporter 3 member 2 ammonium transporter 2 member 1 ammonium transporter 2 ammonium transporter AMT3.1 ammonium transporter AMT2.1 ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 2-like ammonium transporter 2 ammonium transporter 2 ammonium transporter 3 member 1-like ammonium transporter 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 4
hvu04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00350 Tyrosine metabolism 2
osa00360 Phenylalanine metabolism 2
osa00380 Tryptophan metabolism 2
osa00901 Indole alkaloid biosynthesis 2
osa00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi02010 ABC transporters 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 4
gma04016 MAPK signaling pathway - plant 3
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00190 Oxidative phosphorylation 2
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 2
ghi00051 Fructose and mannose metabolism 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 104583779 123059754 123440464 123440465 4327433 4327434 100279304 100304410 8080180 8072566 818409 100785993 100790119 101246876 103865660 103867124 100250641 100252515 7468066 7465025 11442449 25491489 107896862 107958074 106450947 106411537 102593437 102623874 102621578
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