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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100248822   ammonium transporter 3 member 3 
 vvi-r.5   100248822   ammonium transporter 3 member 3 
 vvi-u.5   100256159   ammonium transporter 3 member 1 
 vvi-u.5   100252515   ammonium transporter 3 member 1 
 vvi-u.5   100250641   ammonium transporter 2 
 ath-u.5   AMT2   ammonium transporter 2 
 gma-u.5   AMT3.1   ammonium transporter AMT3.1 
 gma-u.5   AMT2.1   ammonium transporter AMT2.1 
 gma-u.5   AMT2.3   ammonium transporter AMT2.3 
 bra-r.6   103865660   ammonium transporter 2 
 bra-r.6   103867124   ammonium transporter 2 
 ppo-u.5   7468066   ammonium transporter 2 
 ppo-u.5   18107984   ammonium transporter 3 member 1 
 mtr-u.5   25491489   ammonium transporter 2 
 mtr-u.5   11442449   ammonium transporter 3 member 1 
 mtr-u.5   11405627   ammonium transporter 2 
 ghi-r.1   107958074   ammonium transporter 2 
 ghi-r.1   107948950   ammonium transporter 2 
 ghi-r.1   107896862   ammonium transporter 3 member 1 
 bna-r.1   106411537   ammonium transporter 2 
 bna-r.1   106450947   ammonium transporter 2-like 
 bna-r.1   106447666   ammonium transporter 2 
 cit-r.1   102623874   ammonium transporter 3 member 1-like 
 cit-r.1   102621578   ammonium transporter 2 
 sly-u.5   101246876   ammonium transporter 2 
 sot-r.1   102593437   ammonium transporter 2 
 nta-r.1   107805306   ammonium transporter 2 
 osa-u.5   4339064   ammonium transporter 2 member 1-like 
 osa-u.5   4334717   ammonium transporter 3 member 2-like 
 zma-u.5   110991263   uncharacterized LOC110991263 
 zma-u.5   100279304   ammonium transporter 2 
 zma-u.5   100304410   Ammonium transporter 2 
 hvu-r.1   123399422   ammonium transporter 3 member 2 
 hvu-r.1   123444973   ammonium transporter 2 member 1 
 hvu-r.1   123440565   ammonium transporter 2 member 3 
 sbi-r.1   8072566   ammonium transporter 2 member 1 
 sbi-r.1   8062391   ammonium transporter 3 member 1 
 sbi-r.1   8061048   ammonium transporter 3 member 3 
 bdi-r.1   100834472   ammonium transporter 3 member 2 

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Top 50 coexpressed genes to 100248822 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100248822 (vvi-u.5 coexpression data)

CoexMap"100248822"


vviLOC100248822 | Entrez gene ID : 100248822      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma hvu sbi bdi cre tae
Paralog 5 1 3 2 2 3 3 3 2 1 1 1 2 3 3 3 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0072488 [list] [network] ammonium transmembrane transport  (13 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (987 genes)  IEA  
GO MF
GO:0008519 [list] [network] ammonium channel activity  (13 genes)  IEA  
Protein XP_002271004.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  chlo 1,  cyto 1,  vacu 1,  chlo_mito 1  (predict for XP_002271004.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002271004.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100248822
vvi-r.5
for
100248822
vvi-u.5
for
100256159
vvi-u.5
for
100252515
vvi-u.5
for
100250641
ath-u.5
for
AMT2
gma-u.5
for
AMT3.1
gma-u.5
for
AMT2.1
gma-u.5
for
AMT2.3
bra-r.6
for
103865660
bra-r.6
for
103867124
ppo-u.5
for
7468066
ppo-u.5
for
18107984
mtr-u.5
for
25491489
mtr-u.5
for
11442449
mtr-u.5
for
11405627
ghi-r.1
for
107958074
ghi-r.1
for
107948950
ghi-r.1
for
107896862
bna-r.1
for
106411537
bna-r.1
for
106450947
bna-r.1
for
106447666
cit-r.1
for
102623874
cit-r.1
for
102621578
sly-u.5
for
101246876
sot-r.1
for
102593437
nta-r.1
for
107805306
osa-u.5
for
4339064
osa-u.5
for
4334717
zma-u.5
for
110991263
zma-u.5
for
100279304
zma-u.5
for
100304410
hvu-r.1
for
123399422
hvu-r.1
for
123444973
hvu-r.1
for
123440565
sbi-r.1
for
8072566
sbi-r.1
for
8062391
sbi-r.1
for
8061048
bdi-r.1
for
100834472


Ortholog ID: 1654
Species vvi vvi vvi ath gma gma gma bra bra ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit sly sot nta osa osa osa zma zma zma tae hvu hvu hvu sbi sbi sbi bdi bdi
Symbol LOC100256159 LOC100252515 LOC100250641 AMT2 AMT3.1 AMT2.1 AMT2.3 LOC103865660 LOC103867124 LOC7468066 LOC18107984 LOC7465025 LOC25491489 LOC11442449 LOC11405627 LOC107958074 LOC107896862 LOC107938932 LOC106411537 LOC106450947 LOC106447666 LOC102623874 LOC102621578 LOC101246876 LOC102593437 LOC107805306 LOC4327434 LOC4327433 LOC4324937 LOC110991263 LOC100279304 LOC100304410 LOC123059754 LOC123440565 LOC123440465 LOC123440464 LOC8072566 LOC8061048 LOC8080180 LOC100834472 LOC104583779
Function* ammonium transporter 3 member 1 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 2 ammonium transporter AMT3.1 ammonium transporter AMT2.1 ammonium transporter AMT2.3 ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 2 ammonium transporter 3 member 1 ammonium transporter 2 ammonium transporter 2 ammonium transporter 2-like ammonium transporter 2 ammonium transporter 3 member 1-like ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 ammonium transporter 2 member 2-like ammonium transporter 2 member 3-like ammonium transporter 3 member 1-like uncharacterized LOC110991263 ammonium transporter 2 Ammonium transporter 2 ammonium transporter 2 member 1 ammonium transporter 2 member 3 ammonium transporter 3 member 1-like ammonium transporter 3 member 1 ammonium transporter 2 member 1 ammonium transporter 3 member 3 ammonium transporter 3 member 2 ammonium transporter 3 member 2 ammonium transporter 3 member 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00190 Oxidative phosphorylation 2
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00190 Oxidative phosphorylation 2
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 4
gma04016 MAPK signaling pathway - plant 3
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 2
ghi00051 Fructose and mannose metabolism 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi00051 Fructose and mannose metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00350 Tyrosine metabolism 2
osa00360 Phenylalanine metabolism 2
osa00380 Tryptophan metabolism 2
osa00901 Indole alkaloid biosynthesis 2
osa00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 2
osa00710 Carbon fixation by Calvin cycle 2
osa01200 Carbon metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 4
hvu04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi02010 ABC transporters 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00910 Nitrogen metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100256159 100252515 100250641 818409 100785993 100790119 100798599 103865660 103867124 7468066 18107984 7465025 25491489 11442449 11405627 107958074 107896862 107938932 106411537 106450947 106447666 102623874 102621578 101246876 102593437 107805306 4327434 4327433 4324937 110991263 100279304 100304410 123059754 123440565 123440465 123440464 8072566 8061048 8080180 100834472 104583779
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