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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   ACO1   ACC oxidase 1 
 ath-u.5   ACO1   ACC oxidase 1 
 ath-r.7   ACO1   ACC oxidase 1 
 ath-e.2   ACO1   ACC oxidase 1 
 ath-m.4.bio   ACO1   ACC oxidase 1 
 ath-m.4.hor   ACO1   ACC oxidase 1 
 ath-m.4.lig   ACO1   ACC oxidase 1 
 ath-m.4.str   ACO1   ACC oxidase 1 
 ath-m.4.tis   ACO1   ACC oxidase 1 
 bra-r.6   103842633   1-aminocyclopropane-1-carboxylate oxidase 1 
 bna-r.1   106400855   1-aminocyclopropane-1-carboxylate oxidase 1 
 bna-r.1   106376208   1-aminocyclopropane-1-carboxylate oxidase 1-like 
 bna-r.1   106436068   1-aminocyclopropane-1-carboxylate oxidase 1 
 ghi-r.1   121231941   1-aminocyclopropane-1-carboxylate oxidase 1 
 ghi-r.1   107932273   1-aminocyclopropane-1-carboxylate oxidase 1 
 cit-r.1   102609002   1-aminocyclopropane-1-carboxylate oxidase 1 
 gma-u.5   100794816   1-aminocyclopropane-1-carboxylate oxidase 1 
 gma-u.5   100793294   1-aminocyclopropane-1-carboxylate oxidase 1 
 gma-u.5   100785514   1-aminocyclopropane-1-carboxylate oxidase 1 
 ppo-u.5   7497621   1-aminocyclopropane-1-carboxylate oxidase 1 
 mtr-u.5   11435929   1-aminocyclopropane-1-carboxylate oxidase 1 
 sly-u.5   ACO5   1-aminocyclopropane-1-carboxylate oxidase 
 sot-r.1   102577542   ACC oxidase 
 nta-r.1   107790081   1-aminocyclopropane-1-carboxylate oxidase 1-like 
 nta-r.1   107765010   1-aminocyclopropane-1-carboxylate oxidase 1-like 

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Top 50 coexpressed genes to ACO1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ACO1 (ath-m.9 coexpression data)

CoexMap"816478"


athACO1 | Entrez gene ID : 816478      
Species ath bra bna ghi cit gma ppo mtr sly sot nta vvi bdi osa tae zma cre sbi hvu
Paralog 9 1 3 2 1 3 1 1 1 1 2 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00270 [list] [network] Cysteine and methionine metabolism (125 genes)
GO BP
GO:0071732 [list] [network] cellular response to nitric oxide  (4 genes)  IEP  
GO:0051365 [list] [network] cellular response to potassium ion starvation  (8 genes)  IEP  
GO:0009693 [list] [network] ethylene biosynthetic process  (22 genes)  NAS  
GO:0071398 [list] [network] cellular response to fatty acid  (82 genes)  IEP  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0009815 [list] [network] 1-aminocyclopropane-1-carboxylate oxidase activity  (12 genes)  IEA  
Protein NP_001324863.1 [sequence] [blastp]
NP_179549.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  cyto_plas 2,  nucl 1,  pero 1,  chlo_mito 1  (predict for NP_001324863.1)
cyto 5,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_179549.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001324863.1)
other 8  (predict for NP_179549.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
ACO1
ath-u.5
for
ACO1
ath-r.7
for
ACO1
ath-e.2
for
ACO1
ath-m.4.bio
for
ACO1
ath-m.4.hor
for
ACO1
ath-m.4.lig
for
ACO1
ath-m.4.str
for
ACO1
ath-m.4.tis
for
ACO1
bra-r.6
for
103842633
bna-r.1
for
106400855
bna-r.1
for
106376208
bna-r.1
for
106436068
ghi-r.1
for
121231941
ghi-r.1
for
107932273
cit-r.1
for
102609002
gma-u.5
for
100794816
gma-u.5
for
100793294
gma-u.5
for
100785514
ppo-u.5
for
7497621
mtr-u.5
for
11435929
sly-u.5
for
ACO5
sot-r.1
for
102577542
nta-r.1
for
107790081
nta-r.1
for
107765010


Ortholog ID: 7156
Species ath bra bna bna bna ghi ghi cit gma gma gma ppo mtr sly sot nta nta
Symbol ACO1 LOC103842633 LOC106400855 LOC106376208 LOC106365298 LOC121231941 LOC107932273 LOC102609002 LOC100794816 LOC100793294 LOC100785514 LOC7497621 LOC11435929 ACO5 LOC102577542 LOC107790081 LOC107765010
Function* ACC oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1-like 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase ACC oxidase 1-aminocyclopropane-1-carboxylate oxidase 1-like 1-aminocyclopropane-1-carboxylate oxidase 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 3
ath00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
bra00073 Cutin, suberine and wax biosynthesis 2
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00051 Fructose and mannose metabolism 2
bna00052 Galactose metabolism 2
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00051 Fructose and mannose metabolism 2
bna00052 Galactose metabolism 2
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00051 Fructose and mannose metabolism 2
bna00052 Galactose metabolism 2
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 9
ghi00071 Fatty acid degradation 8
ghi00350 Tyrosine metabolism 8
ghi00592 alpha-Linolenic acid metabolism 8
ghi00620 Pyruvate metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 9
ghi00071 Fatty acid degradation 8
ghi00350 Tyrosine metabolism 8
ghi00592 alpha-Linolenic acid metabolism 8
ghi00620 Pyruvate metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 2
cit00030 Pentose phosphate pathway 2
cit00051 Fructose and mannose metabolism 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 4
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 4
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 3
ppo00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 5
mtr00620 Pyruvate metabolism 4
mtr00071 Fatty acid degradation 3
mtr00350 Tyrosine metabolism 3
mtr00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 4
sly01200 Carbon metabolism 2
sly01230 Biosynthesis of amino acids 2
sly00270 Cysteine and methionine metabolism 2
sly00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00620 Pyruvate metabolism 2
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta00270 Cysteine and methionine metabolism 2
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 4
nta04016 MAPK signaling pathway - plant 4
nta04626 Plant-pathogen interaction 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816478 103842633 106400855 106376208 106365298 121231941 107932273 102609002 100794816 100793294 100785514 7497621 11435929 543800 102577542 107790081 107765010
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