Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G07550   RNI-like superfamily protein 
 ath-u.5   AT3G07550   RNI-like superfamily protein 
 ath-r.7   AT3G07550   RNI-like superfamily protein 
 ath-e.2   AT3G07550   RNI-like superfamily protein 
 ath-m.4.bio   AT3G07550   RNI-like superfamily protein 
 ath-m.4.hor   AT3G07550   RNI-like superfamily protein 
 ath-m.4.lig   AT3G07550   RNI-like superfamily protein 
 ath-m.4.str   AT3G07550   RNI-like superfamily protein 
 ath-m.4.tis   AT3G07550   RNI-like superfamily protein 
 bra-r.6   103870657   F-box/LRR-repeat protein 12 
 bna-r.1   106401407   F-box/LRR-repeat protein 12-like 
 bna-r.1   106452935   F-box/LRR-repeat protein 12 
 ghi-r.1   107912497   F-box/LRR-repeat protein 12 
 ghi-r.1   107924793   F-box/LRR-repeat protein 12 
 cit-r.1   102618197   F-box/LRR-repeat protein 12 
 gma-u.5   102667402   F-box/LRR-repeat protein 12 
 ppo-u.5   18103342   F-box/LRR-repeat protein 12 
 mtr-u.5   25500769   F-box/LRR-repeat protein 12 
 sly-u.5   101253383   F-box/LRR-repeat protein 12 
 sot-r.1   102587561   F-box/LRR-repeat protein 12 
 nta-r.1   107811863   F-box/LRR-repeat protein 12 
 nta-r.1   107767506   F-box/LRR-repeat protein 12-like 
 osa-u.5   4350237   F-box/LRR-repeat protein 12 
 zma-u.5   100501389   uncharacterized LOC100501389 
 tae-r.2   123086787   F-box/LRR-repeat protein 12 
 tae-r.2   123096182   F-box/LRR-repeat protein 12 
 tae-r.2   123091185   F-box/LRR-repeat protein 12 
 hvu-r.1   123447817   F-box/LRR-repeat protein 12 
 sbi-r.1   8057111   F-box/LRR-repeat protein 12 
 bdi-r.1   100840564   F-box/LRR-repeat protein 12 

close


Top 50 coexpressed genes to AT3G07550 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G07550 (ath-m.9 coexpression data)

CoexMap"819944"


athAT3G07550 | Entrez gene ID : 819944      
Species ath bra bna ghi cit gma ppo mtr sly sot nta osa zma tae hvu sbi bdi vvi cre
Paralog 9 1 2 2 1 1 1 1 1 1 2 1 1 3 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (219 genes)  TAS  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_001325806.1 [sequence] [blastp]
NP_566312.1 [sequence] [blastp]
NP_850534.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  plas 1,  cysk 1,  golg 1,  golg_plas 1,  cysk_plas 1  (predict for NP_001325806.1)
cyto 6,  nucl 3  (predict for NP_566312.1)
cyto 6,  nucl 3  (predict for NP_850534.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001325806.1)
other 9  (predict for NP_566312.1)
other 9  (predict for NP_850534.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G07550
ath-u.5
for
AT3G07550
ath-r.7
for
AT3G07550
ath-e.2
for
AT3G07550
ath-m.4.bio
for
AT3G07550
ath-m.4.hor
for
AT3G07550
ath-m.4.lig
for
AT3G07550
ath-m.4.str
for
AT3G07550
ath-m.4.tis
for
AT3G07550
bra-r.6
for
103870657
bna-r.1
for
106401407
bna-r.1
for
106452935
ghi-r.1
for
107912497
ghi-r.1
for
107924793
cit-r.1
for
102618197
gma-u.5
for
102667402
ppo-u.5
for
18103342
mtr-u.5
for
25500769
sly-u.5
for
101253383
sot-r.1
for
102587561
nta-r.1
for
107811863
nta-r.1
for
107767506
osa-u.5
for
4350237
zma-u.5
for
100501389
tae-r.2
for
123086787
tae-r.2
for
123096182
tae-r.2
for
123091185
hvu-r.1
for
123447817
sbi-r.1
for
8057111
bdi-r.1
for
100840564


Ortholog ID: 10742
Species ath bra bna bna ghi ghi cit gma ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT3G07550 LOC103870657 LOC106401407 LOC106452935 LOC107912497 LOC107924793 LOC102618197 LOC102667402 LOC18103342 LOC25500769 LOC101253383 LOC102587561 LOC107811863 LOC107767506 LOC4350237 LOC100501389 LOC123086787 LOC123096182 LOC123091185 LOC123447817 LOC8057111 LOC100840564
Function* RNI-like superfamily protein F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12-like F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12-like F-box/LRR-repeat protein 12 uncharacterized LOC100501389 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 12
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00600 Sphingolipid metabolism 2
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna01200 Carbon metabolism 4
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna01200 Carbon metabolism 4
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00910 Nitrogen metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00410 beta-Alanine metabolism 3
mtr00240 Pyrimidine metabolism 2
mtr00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819944 103870657 106401407 106452935 107912497 107924793 102618197 102667402 18103342 25500769 101253383 102587561 107811863 107767506 4350237 100501389 123086787 123096182 123091185 123447817 8057111 100840564
The preparation time of this page was 0.2 [sec].