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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G23325   Splicing factor 3B subunit 5/RDS3 complex subunit 10 
 ath-u.5   AT3G23325   Splicing factor 3B subunit 5/RDS3 complex subunit 10 
 ath-r.7   AT3G23325   Splicing factor 3B subunit 5/RDS3 complex subunit 10 
 ath-e.2   AT3G23325   Splicing factor 3B subunit 5/RDS3 complex subunit 10 
 ath-m.4.bio   AT3G23325   Splicing factor 3B subunit 5/RDS3 complex subunit 10 
 ath-m.4.hor   AT3G23325   Splicing factor 3B subunit 5/RDS3 complex subunit 10 
 ath-m.4.lig   AT3G23325   Splicing factor 3B subunit 5/RDS3 complex subunit 10 
 ath-m.4.str   AT3G23325   Splicing factor 3B subunit 5/RDS3 complex subunit 10 
 ath-m.4.tis   AT3G23325   Splicing factor 3B subunit 5/RDS3 complex subunit 10 
 ath-u.5   AT4G14342   Splicing factor 3B subunit 5/RDS3 complex subunit 10 
 bra-r.6   103828752   uncharacterized protein At4g14342 
 bra-r.6   103870650   uncharacterized protein At4g14342 
 bna-r.1   106357890   uncharacterized protein At4g14342 
 bna-r.1   106445744   uncharacterized protein At4g14342 
 bna-r.1   106421401   uncharacterized protein At4g14342 
 ghi-r.1   107941154   uncharacterized protein At4g14342 
 ghi-r.1   107906329   uncharacterized protein At4g14342 
 cit-r.1   102626653   uncharacterized protein At4g14342 
 cit-r.1   102616163   hypothetical protein 
 gma-u.5   100817663   uncharacterized protein At4g14342 
 gma-u.5   100305893   uncharacterized protein At4g14342 
 ppo-u.5   7467542   uncharacterized protein At4g14342 
 ppo-u.5   7475394   uncharacterized protein At4g14342 
 mtr-u.5   11416194   uncharacterized protein At4g14342 
 mtr-u.5   11407458   uncharacterized protein At4g14342 
 sly-u.5   101247946   uncharacterized protein At4g14342 
 sly-u.5   101244858   uncharacterized protein At4g14342-like 
 sot-r.1   102605884   uncharacterized protein At4g14342 
 sot-r.1   102597856   uncharacterized protein At4g14342-like 
 sot-r.1   102596277   uncharacterized protein At4g14342 
 nta-r.1   107769380   uncharacterized protein At4g14342 
 nta-r.1   107817263   uncharacterized protein At4g14342 
 osa-u.5   4345702   uncharacterized protein At4g14342 
 zma-u.5   100285762   uncharacterized LOC100285762 
 zma-u.5   103653311   uncharacterized protein At4g14342 
 tae-r.2   123065971   uncharacterized protein At4g14342 
 tae-r.2   123182894   uncharacterized protein At4g14342 
 tae-r.2   123141020   uncharacterized protein At4g14342 
 hvu-r.1   123447752   uncharacterized protein At4g14342 
 hvu-r.1   123448972   uncharacterized protein At4g14342-like 
 sbi-r.1   8059073   uncharacterized protein At4g14342 
 sbi-r.1   8077862   uncharacterized protein At4g14342 
 bdi-r.1   100841881   uncharacterized protein At4g14342 
 cre-r.1   CHLRE_14g627900v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G23325 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G23325 (ath-m.9 coexpression data)

CoexMap"821913"


athAT3G23325 | Entrez gene ID : 821913      
Species ath bra bna ghi cit gma ppo mtr sly sot nta osa zma tae hvu sbi bdi cre vvi
Paralog 10 2 3 2 2 2 2 2 2 3 2 1 2 3 2 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03040 [list] [network] Spliceosome (243 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_566727.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  extr 1,  pero 1  (predict for NP_566727.1)
Subcellular
localization
TargetP
other 7  (predict for NP_566727.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G23325
ath-u.5
for
AT3G23325
ath-r.7
for
AT3G23325
ath-e.2
for
AT3G23325
ath-m.4.bio
for
AT3G23325
ath-m.4.hor
for
AT3G23325
ath-m.4.lig
for
AT3G23325
ath-m.4.str
for
AT3G23325
ath-m.4.tis
for
AT3G23325
ath-u.5
for
AT4G14342
bra-r.6
for
103828752
bra-r.6
for
103870650
bna-r.1
for
106357890
bna-r.1
for
106445744
bna-r.1
for
106421401
ghi-r.1
for
107941154
ghi-r.1
for
107906329
cit-r.1
for
102626653
cit-r.1
for
102616163
gma-u.5
for
100817663
gma-u.5
for
100305893
ppo-u.5
for
7467542
ppo-u.5
for
7475394
mtr-u.5
for
11416194
mtr-u.5
for
11407458
sly-u.5
for
101247946
sly-u.5
for
101244858
sot-r.1
for
102605884
sot-r.1
for
102597856
sot-r.1
for
102596277
nta-r.1
for
107769380
nta-r.1
for
107817263
osa-u.5
for
4345702
zma-u.5
for
100285762
zma-u.5
for
103653311
tae-r.2
for
123065971
tae-r.2
for
123182894
tae-r.2
for
123141020
hvu-r.1
for
123447752
hvu-r.1
for
123448972
sbi-r.1
for
8059073
sbi-r.1
for
8077862
bdi-r.1
for
100841881
cre-r.1
for
CHLRE_14g627900v5


Ortholog ID: 4559
Species ath ath bra bra bna bna bna ghi ghi cit cit gma gma ppo ppo mtr mtr sly sly sot sot sot nta nta osa zma zma tae tae tae hvu hvu sbi sbi bdi cre
Symbol AT3G23325 AT4G14342 LOC103828752 LOC103870650 LOC106357890 LOC106445744 LOC106421401 LOC107941154 LOC107906329 LOC102626653 LOC102616163 LOC100817663 LOC100305893 LOC7467542 LOC7475394 LOC11416194 LOC11407458 LOC101247946 LOC101244858 LOC102605884 LOC102597856 LOC102596277 LOC107769380 LOC107817263 LOC4345702 LOC100285762 LOC103653311 LOC123182894 LOC123182694 LOC123143496 LOC123447752 LOC123448972 LOC8059073 LOC8077862 LOC100841881 CHLRE_14g627900v5
Function* Splicing factor 3B subunit 5/RDS3 complex subunit 10 Splicing factor 3B subunit 5/RDS3 complex subunit 10 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 hypothetical protein uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342-like uncharacterized protein At4g14342 uncharacterized protein At4g14342-like uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized LOC100285762 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342-like uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra04145 Phagosome 2
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra00190 Oxidative phosphorylation 2
bra03013 Nucleocytoplasmic transport 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna03060 Protein export 3
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi03010 Ribosome 4
ghi03022 Basal transcription factors 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 10
ghi03010 Ribosome 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit03020 RNA polymerase 2
cit03420 Nucleotide excision repair 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03040 Spliceosome 5
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma04120 Ubiquitin mediated proteolysis 4
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 3
ppo04075 Plant hormone signal transduction 3
ppo03040 Spliceosome 2
ppo03020 RNA polymerase 2
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 6
mtr00190 Oxidative phosphorylation 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03010 Ribosome 3
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 5
sot03040 Spliceosome 5
sot03083 Polycomb repressive complex 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03010 Ribosome 5
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 5
sot03040 Spliceosome 5
sot04141 Protein processing in endoplasmic reticulum 3
sot03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03050 Proteasome 4
nta03018 RNA degradation 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00510 N-Glycan biosynthesis 3
zma00513 Various types of N-glycan biosynthesis 3
zma04141 Protein processing in endoplasmic reticulum 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 8
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae03040 Spliceosome 4
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae00590 Arachidonic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 4
hvu04148 Efferocytosis 2
hvu03050 Proteasome 2
hvu00020 Citrate cycle (TCA cycle) 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
bdi03040 Spliceosome 2
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 3
cre03040 Spliceosome 2
cre03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821913 827077 103828752 103870650 106357890 106445744 106421401 107941154 107906329 102626653 102616163 100817663 100305893 7467542 7475394 11416194 11407458 101247946 101244858 102605884 102597856 102596277 107769380 107817263 4345702 100285762 103653311 123182894 123182694 123143496 123447752 123448972 8059073 8077862 100841881 5718277
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