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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G49100   Signal recognition particle, SRP9/SRP14 subunit 
 ath-u.5   AT3G49100   Signal recognition particle, SRP9/SRP14 subunit 
 ath-r.7   AT3G49100   Signal recognition particle, SRP9/SRP14 subunit 
 ath-e.2   AT3G49100   Signal recognition particle, SRP9/SRP14 subunit 
 ath-m.4.bio   AT3G49100   Signal recognition particle, SRP9/SRP14 subunit 
 ath-m.4.hor   AT3G49100   Signal recognition particle, SRP9/SRP14 subunit 
 ath-m.4.lig   AT3G49100   Signal recognition particle, SRP9/SRP14 subunit 
 ath-m.4.str   AT3G49100   Signal recognition particle, SRP9/SRP14 subunit 
 ath-m.4.tis   AT3G49100   Signal recognition particle, SRP9/SRP14 subunit 
 bra-r.6   103873502   signal recognition particle 9 kDa protein 
 bra-r.6   103873088   signal recognition particle 9 kDa protein 
 bna-r.1   106387837   signal recognition particle 9 kDa protein-like 
 bna-r.1   106347449   signal recognition particle 9 kDa protein 
 bna-r.1   106345609   signal recognition particle 9 kDa protein 
 ghi-r.1   107922991   signal recognition particle 9 kDa protein 
 ghi-r.1   107936478   signal recognition particle 9 kDa protein 
 ghi-r.1   121219926   signal recognition particle 9 kDa protein 
 cit-r.1   102627275   signal recognition particle 9 kDa protein 
 gma-u.5   100811012   signal recognition particle 9 kDa protein 
 gma-u.5   100788603   signal recognition particle 9 kDa protein 
 gma-u.5   100776490   signal recognition particle 9 kDa protein 
 vvi-u.5   100252725   signal recognition particle 9 kDa protein 
 ppo-u.5   7471995   signal recognition particle 9 kDa protein 
 ppo-u.5   7454329   signal recognition particle 9 kDa protein 
 mtr-u.5   25484339   signal recognition particle 9 kDa protein 
 sly-u.5   101254464   signal recognition particle 9 kDa protein 
 sot-r.1   102597552   signal recognition particle 9 kDa protein 
 nta-r.1   107793113   signal recognition particle 9 kDa protein 
 osa-u.5   4340680   signal recognition particle 9 kDa protein 
 zma-u.5   542750   signal recognition particle protein subunit 9 
 zma-u.5   100216656   Signal recognition particle protein 
 tae-r.2   123160076   signal recognition particle 9 kDa protein 
 tae-r.2   123150731   signal recognition particle 9 kDa protein 
 tae-r.2   123167915   signal recognition particle 9 kDa protein 
 hvu-r.1   123411626   signal recognition particle 9 kDa protein 
 sbi-r.1   8065748   signal recognition particle 9 kDa protein 
 bdi-r.1   100840601   signal recognition particle 9 kDa protein 
 cre-r.1   CHLRE_12g546250v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G49100 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G49100 (ath-m.9 coexpression data)

CoexMap"824071"


athAT3G49100 | Entrez gene ID : 824071    
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 3 1 2 1 1 1 1 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03060 [list] [network] Protein export (62 genes)
GO BP
GO:0045900 [list] [network] negative regulation of translational elongation  (1 genes)  IEA  
GO:0006614 [list] [network] SRP-dependent cotranslational protein targeting to membrane  (8 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0008312 [list] [network] 7S RNA binding  (6 genes)  IEA  
Protein NP_001327913.1 [sequence] [blastp]
NP_190479.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  extr 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001327913.1)
chlo 6,  mito 1,  extr 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for NP_190479.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001327913.1)
other 7  (predict for NP_190479.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G49100
ath-u.5
for
AT3G49100
ath-r.7
for
AT3G49100
ath-e.2
for
AT3G49100
ath-m.4.bio
for
AT3G49100
ath-m.4.hor
for
AT3G49100
ath-m.4.lig
for
AT3G49100
ath-m.4.str
for
AT3G49100
ath-m.4.tis
for
AT3G49100
bra-r.6
for
103873502
bra-r.6
for
103873088
bna-r.1
for
106387837
bna-r.1
for
106347449
bna-r.1
for
106345609
ghi-r.1
for
107922991
ghi-r.1
for
107936478
ghi-r.1
for
121219926
cit-r.1
for
102627275
gma-u.5
for
100811012
gma-u.5
for
100788603
gma-u.5
for
100776490
vvi-u.5
for
100252725
ppo-u.5
for
7471995
ppo-u.5
for
7454329
mtr-u.5
for
25484339
sly-u.5
for
101254464
sot-r.1
for
102597552
nta-r.1
for
107793113
osa-u.5
for
4340680
zma-u.5
for
542750
zma-u.5
for
100216656
tae-r.2
for
123160076
tae-r.2
for
123150731
tae-r.2
for
123167915
hvu-r.1
for
123411626
sbi-r.1
for
8065748
bdi-r.1
for
100840601
cre-r.1
for
CHLRE_12g546250v5


Ortholog ID: 6893
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr sly sot nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol AT3G49100 LOC103873502 LOC103873088 LOC106387837 LOC106345609 LOC106449025 LOC107922991 LOC107936478 LOC121219926 LOC102627275 LOC100811012 LOC100788603 LOC100776490 LOC100252725 LOC7471995 LOC7454329 LOC25484339 LOC101254464 LOC102597552 LOC107793113 LOC4340680 LOC542750 LOC100216656 LOC123160076 LOC123150731 LOC123167915 LOC123411626 LOC8065748 LOC100840601 CHLRE_12g546250v5
Function* Signal recognition particle, SRP9/SRP14 subunit signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein-like signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle protein subunit 9 Signal recognition particle protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 4
ath00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra04142 Lysosome 4
bra04145 Phagosome 4
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna03060 Protein export 4
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 4
bna03018 RNA degradation 3
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna03060 Protein export 4
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi03060 Protein export 4
ghi04141 Protein processing in endoplasmic reticulum 3
ghi04145 Phagosome 3
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03010 Ribosome 2
ghi00230 Purine metabolism 2
ghi03060 Protein export 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 3
cit03060 Protein export 2
cit00513 Various types of N-glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 3
gma00513 Various types of N-glycan biosynthesis 3
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi03040 Spliceosome 3
vvi03018 RNA degradation 2
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03060 Protein export 2
ppo03020 RNA polymerase 2
ppo03420 Nucleotide excision repair 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo00190 Oxidative phosphorylation 3
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03060 Protein export 4
mtr04141 Protein processing in endoplasmic reticulum 4
mtr04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 3
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 4
sot04142 Lysosome 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 5
zma03060 Protein export 3
zma00190 Oxidative phosphorylation 3
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
tae03440 Homologous recombination 3
tae03060 Protein export 3
tae04120 Ubiquitin mediated proteolysis 2
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 4
tae03060 Protein export 3
tae03050 Proteasome 3
tae03440 Homologous recombination 3
tae00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
tae03440 Homologous recombination 3
tae03060 Protein export 3
tae00510 N-Glycan biosynthesis 3
tae00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 3
bdi03040 Spliceosome 3
bdi03050 Proteasome 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
cre03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824071 103873502 103873088 106387837 106345609 106449025 107922991 107936478 121219926 102627275 100811012 100788603 100776490 100252725 7471995 7454329 25484339 101254464 102597552 107793113 4340680 542750 100216656 123160076 123150731 123167915 123411626 8065748 100840601 5719583
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