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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G58700   Ribosomal L5P family protein 
 ath-u.5   AT3G58700   Ribosomal L5P family protein 
 ath-r.7   AT3G58700   Ribosomal L5P family protein 
 ath-e.2   AT3G58700   Ribosomal L5P family protein 
 ath-m.4.bio   AT3G58700   Ribosomal L5P family protein 
 ath-m.4.hor   AT3G58700   Ribosomal L5P family protein 
 ath-m.4.lig   AT3G58700   Ribosomal L5P family protein 
 ath-m.4.str   AT3G58700   Ribosomal L5P family protein 
 ath-m.4.tis   AT3G58700   Ribosomal L5P family protein 
 ath-u.5   RPL16A   ribosomal protein large subunit 16A 
 ath-u.5   RPL16B   ribosomal protein L16B 
 ath-u.5   AT5G45775   Ribosomal L5P family protein 
 bra-r.6   103862966   60S ribosomal protein L11-1 
 bra-r.6   103856798   60S ribosomal protein L11-2 
 bra-r.6   103861011   60S ribosomal protein L11-2 
 bna-r.1   106381681   60S ribosomal protein L11-1 
 bna-r.1   125590042   60S ribosomal protein L11-2 
 bna-r.1   106406958   60S ribosomal protein L11-1 
 ghi-r.1   107962299   60S ribosomal protein L11 
 ghi-r.1   107960236   60S ribosomal protein L11 
 ghi-r.1   107909651   60S ribosomal protein L11 
 cit-r.1   102620439   60S ribosomal protein L11-like 
 cit-r.1   102625025   60S ribosomal protein L11 
 cit-r.1   102630091   60S ribosomal protein L11 
 gma-u.5   100812386   60S ribosomal protein L11 
 gma-u.5   100810082   60S ribosomal protein L11 
 gma-u.5   100819731   60S ribosomal protein L11 
 vvi-u.5   100251464   large ribosomal subunit protein uL5z 
 vvi-u.5   100243655   large ribosomal subunit protein uL5 
 ppo-u.5   7455899   60S ribosomal protein L11 
 ppo-u.5   7485258   60S ribosomal protein L11 
 ppo-u.5   7485259   60S ribosomal protein L11 
 mtr-u.5   11422951   60S ribosomal protein L11 
 mtr-u.5   11426149   60S ribosomal protein L11 
 mtr-u.5   11445039   60S ribosomal protein L11 
 sly-u.5   101259713   large ribosomal subunit protein uL5z 
 sly-u.5   101246764   large ribosomal subunit protein uL5z 
 sly-u.5   101262882   large ribosomal subunit protein uL5z 
 sot-r.1   102584908   60S ribosomal protein L11-2-like 
 sot-r.1   102584982   60S ribosomal protein L11-1 
 sot-r.1   102598285   60S ribosomal protein L11-1 
 nta-r.1   107822394   large ribosomal subunit protein uL5z 
 nta-r.1   107763118   large ribosomal subunit protein uL5z 
 nta-r.1   107764084   large ribosomal subunit protein uL5z 
 osa-u.5   4328826   large ribosomal subunit protein uL5 
 osa-u.5   4341262   large ribosomal subunit protein uL5 
 osa-u.5   4338077   60S ribosomal protein L11-like 
 zma-u.5   100282010   60S ribosomal protein L11-1 
 zma-u.5   100283310   60S ribosomal protein L11-1 
 zma-u.5   100193696   60S ribosomal protein L11-like 
 tae-r.2   123115714   60S ribosomal protein L11 
 tae-r.2   123069149   60S ribosomal protein L11 
 tae-r.2   123060615   60S ribosomal protein L11 
 hvu-r.1   123443087   60S ribosomal protein L11 
 hvu-r.1   123427513   60S ribosomal protein L11-like 
 sbi-r.1   8085572   60S ribosomal protein L11 
 sbi-r.1   110435040   60S ribosomal protein L11-like 
 bdi-r.1   100822639   60S ribosomal protein L11 
 bdi-r.1   100843642   60S ribosomal protein L11 
 bdi-r.1   100829607   60S ribosomal protein L11 
 cre-r.1   CHLRE_01g027000v5   ribosomal protein L11 

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Top 50 coexpressed genes to AT3G58700 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G58700 (ath-m.9 coexpression data)

CoexMap"825039"


athAT3G58700 | Entrez gene ID : 825039    
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 3 3 3 3 3 2 3 3 3 3 3 3 3 3 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (124 genes)  HDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0005773 [list] [network] vacuole  (984 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  RCA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA RCA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  HDA IDA  
Protein NP_191429.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  plas 3,  cyto_nucl 3  (predict for NP_191429.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_191429.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G58700
ath-u.5
for
AT3G58700
ath-r.7
for
AT3G58700
ath-e.2
for
AT3G58700
ath-m.4.bio
for
AT3G58700
ath-m.4.hor
for
AT3G58700
ath-m.4.lig
for
AT3G58700
ath-m.4.str
for
AT3G58700
ath-m.4.tis
for
AT3G58700
ath-u.5
for
RPL16A
ath-u.5
for
RPL16B
ath-u.5
for
AT5G45775
bra-r.6
for
103862966
bra-r.6
for
103856798
bra-r.6
for
103861011
bna-r.1
for
106381681
bna-r.1
for
125590042
bna-r.1
for
106406958
ghi-r.1
for
107962299
ghi-r.1
for
107960236
ghi-r.1
for
107909651
cit-r.1
for
102620439
cit-r.1
for
102625025
cit-r.1
for
102630091
gma-u.5
for
100812386
gma-u.5
for
100810082
gma-u.5
for
100819731
vvi-u.5
for
100251464
vvi-u.5
for
100243655
ppo-u.5
for
7455899
ppo-u.5
for
7485258
ppo-u.5
for
7485259
mtr-u.5
for
11422951
mtr-u.5
for
11426149
mtr-u.5
for
11445039
sly-u.5
for
101259713
sly-u.5
for
101246764
sly-u.5
for
101262882
sot-r.1
for
102584908
sot-r.1
for
102584982
sot-r.1
for
102598285
nta-r.1
for
107822394
nta-r.1
for
107763118
nta-r.1
for
107764084
osa-u.5
for
4328826
osa-u.5
for
4341262
osa-u.5
for
4338077
zma-u.5
for
100282010
zma-u.5
for
100283310
zma-u.5
for
100193696
tae-r.2
for
123115714
tae-r.2
for
123069149
tae-r.2
for
123060615
hvu-r.1
for
123443087
hvu-r.1
for
123427513
sbi-r.1
for
8085572
sbi-r.1
for
110435040
bdi-r.1
for
100822639
bdi-r.1
for
100843642
bdi-r.1
for
100829607
cre-r.1
for
CHLRE_01g027000v5


Ortholog ID: 918
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi bdi cre
Symbol AT3G58700 RPL16A AT5G45775 LOC103861011 LOC103853664 LOC103827776 LOC125590042 LOC106415365 LOC106415366 LOC107909651 LOC107905822 LOC107901696 LOC102620439 LOC102625025 LOC102630091 LOC100812386 LOC100810082 LOC100819731 LOC100251464 LOC100243655 LOC7455899 LOC7485258 LOC7485259 LOC11422951 LOC11426149 LOC11445039 LOC101246764 LOC101262882 LOC101268775 LOC102584908 LOC102598285 LOC102606209 LOC107785771 LOC107798565 LOC107816202 LOC4328826 LOC4341262 LOC4338077 LOC100282010 LOC100193696 LOC100193878 LOC123115714 LOC123060615 LOC606335 LOC123443087 LOC123427513 LOC8085572 LOC8084319 LOC100822639 LOC100843642 LOC100829607 CHLRE_01g027000v5
Function* Ribosomal L5P family protein ribosomal protein large subunit 16A Ribosomal L5P family protein 60S ribosomal protein L11-2 60S ribosomal protein L11-1 60S ribosomal protein L11-2 60S ribosomal protein L11-2 60S ribosomal protein L11-1 60S ribosomal protein L11-1 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11-like 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 large ribosomal subunit protein uL5z large ribosomal subunit protein uL5 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 large ribosomal subunit protein uL5z large ribosomal subunit protein uL5z large ribosomal subunit protein uL5z 60S ribosomal protein L11-2-like 60S ribosomal protein L11-1 60S ribosomal protein L11-1 large ribosomal subunit protein uL5z large ribosomal subunit protein uL5z-like large ribosomal subunit protein uL5z large ribosomal subunit protein uL5 large ribosomal subunit protein uL5 60S ribosomal protein L11-like 60S ribosomal protein L11-1 60S ribosomal protein L11-like 60S ribosomal protein L11-1 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11-like 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 ribosomal protein L11
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
sly03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825039 818874 834617 103861011 103853664 103827776 125590042 106415365 106415366 107909651 107905822 107901696 102620439 102625025 102630091 100812386 100810082 100819731 100251464 100243655 7455899 7485258 7485259 11422951 11426149 11445039 101246764 101262882 101268775 102584908 102598285 102606209 107785771 107798565 107816202 4328826 4341262 4338077 100282010 100193696 100193878 123115714 123060615 606335 123443087 123427513 8085572 8084319 100822639 100843642 100829607 5715302
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