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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   OTP86   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   OTP86   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-r.7   OTP86   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-e.2   OTP86   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   OTP86   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   OTP86   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   OTP86   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   OTP86   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   OTP86   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bna-r.1   106396743   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 ghi-r.1   107915329   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 ghi-r.1   107950887   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 cit-r.1   102617775   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 gma-u.5   100777780   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 vvi-u.5   100853812   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 mtr-u.5   11431268   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 sly-u.5   101265961   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 sot-r.1   102603734   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 nta-r.1   107785013   pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like 
 nta-r.1   107791344   pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like 
 osa-u.5   4336112   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 tae-r.2   123189487   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 tae-r.2   123053589   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 hvu-r.1   123426970   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 sbi-r.1   8058681   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 bdi-r.1   100832010   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 

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Top 50 coexpressed genes to OTP86 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to OTP86 (ath-m.9 coexpression data)

CoexMap"825512"


athOTP86 | Entrez gene ID : 825512      
Species ath bna ghi cit gma vvi mtr sly sot nta osa tae hvu sbi bdi ppo zma bra cre
Paralog 9 1 2 1 1 1 1 1 1 2 1 2 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031425 [list] [network] chloroplast RNA processing  (28 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_001319827.1 [sequence] [blastp]
NP_191896.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  extr 1  (predict for NP_001319827.1)
chlo 9,  nucl 1,  extr 1  (predict for NP_191896.2)
Subcellular
localization
TargetP
chlo 3  (predict for NP_001319827.1)
chlo 3  (predict for NP_191896.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
OTP86
ath-u.5
for
OTP86
ath-r.7
for
OTP86
ath-e.2
for
OTP86
ath-m.4.bio
for
OTP86
ath-m.4.hor
for
OTP86
ath-m.4.lig
for
OTP86
ath-m.4.str
for
OTP86
ath-m.4.tis
for
OTP86
bna-r.1
for
106396743
ghi-r.1
for
107915329
ghi-r.1
for
107950887
cit-r.1
for
102617775
gma-u.5
for
100777780
vvi-u.5
for
100853812
mtr-u.5
for
11431268
sly-u.5
for
101265961
sot-r.1
for
102603734
nta-r.1
for
107785013
nta-r.1
for
107791344
osa-u.5
for
4336112
tae-r.2
for
123189487
tae-r.2
for
123053589
hvu-r.1
for
123426970
sbi-r.1
for
8058681
bdi-r.1
for
100832010


Ortholog ID: 11977
Species ath bna ghi ghi cit gma vvi mtr sly sot nta nta osa tae tae hvu sbi bdi
Symbol OTP86 LOC106396743 LOC107915329 LOC107950887 LOC102617775 LOC100777780 LOC100853812 LOC11431268 LOC101265961 LOC102603734 LOC107785013 LOC107791344 LOC4336112 LOC123189487 LOC123053589 LOC123426970 LOC8058681 LOC100832010
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu00860 Porphyrin metabolism 2
hvu01240 Biosynthesis of cofactors 2
hvu00300 Lysine biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825512 106396743 107915329 107950887 102617775 100777780 100853812 11431268 101265961 102603734 107785013 107791344 4336112 123189487 123053589 123426970 8058681 100832010
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