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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107785013   pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like 
 sly-u.5   101265961   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 ath-u.5   OTP86   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100777780   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 vvi-u.5   100853812   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 mtr-u.5   11431268   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 osa-u.5   4336112   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 

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Top 50 coexpressed genes to 107785013 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107785013 (nta-r.1 coexpression data)

CoexMap"107785013"


ntaLOC107785013 | Entrez gene ID : 107785013      
Species nta sly ath gma vvi mtr osa bdi hvu bra cit bna ppo sbi ghi sot cre tae zma
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (9561 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016461717.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_016461717.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016461717.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107785013
sly-u.5
for
101265961
ath-u.5
for
OTP86
gma-u.5
for
100777780
vvi-u.5
for
100853812
mtr-u.5
for
11431268
osa-u.5
for
4336112


Ortholog ID: 11977
Species nta nta sly sot ath gma vvi mtr ghi ghi bna cit osa tae hvu sbi bdi
Symbol LOC107785013 LOC107791344 LOC101265961 LOC102603734 OTP86 LOC100777780 LOC100853812 LOC11431268 LOC107950887 LOC107915329 LOC106396743 LOC102617775 LOC4336112 LOC123053589 LOC123426970 LOC8058681 LOC100832010
Function* pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu00860 Porphyrin metabolism 2
hvu01240 Biosynthesis of cofactors 2
hvu00300 Lysine biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107785013 107791344 101265961 102603734 825512 100777780 100853812 11431268 107950887 107915329 106396743 102617775 4336112 123053589 123426970 8058681 100832010
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