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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100832010   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 tae-r.2   123189487   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 tae-r.2   123053589   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 hvu-r.1   123426970   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 osa-u.5   4336112   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 sbi-r.1   8058681   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 ath-u.5   OTP86   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100777780   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 sly-u.5   101265961   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 vvi-u.5   100853812   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 mtr-u.5   11431268   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 ghi-r.1   107915329   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 ghi-r.1   107950887   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 bna-r.1   106396743   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 sot-r.1   102603734   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 cit-r.1   102617775   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 nta-r.1   107785013   pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like 
 nta-r.1   107791344   pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like 

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Top 50 coexpressed genes to 100832010 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100832010 (bdi-r.1 coexpression data)

CoexMap"100832010"


bdiLOC100832010 | Entrez gene ID : 100832010      
Species bdi tae hvu osa sbi ath gma sly vvi mtr ghi bna sot cit nta bra zma cre ppo
Paralog 1 2 1 1 1 1 1 1 1 1 2 1 1 1 2 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (707 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003581340.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 2,  mito 1  (predict for XP_003581340.2)
Subcellular
localization
TargetP
mito 3  (predict for XP_003581340.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100832010
tae-r.2
for
123189487
tae-r.2
for
123053589
hvu-r.1
for
123426970
osa-u.5
for
4336112
sbi-r.1
for
8058681
ath-u.5
for
OTP86
gma-u.5
for
100777780
sly-u.5
for
101265961
vvi-u.5
for
100853812
mtr-u.5
for
11431268
ghi-r.1
for
107915329
ghi-r.1
for
107950887
bna-r.1
for
106396743
sot-r.1
for
102603734
cit-r.1
for
102617775
nta-r.1
for
107785013
nta-r.1
for
107791344


Ortholog ID: 11977
Species bdi tae tae hvu osa sbi ath gma sly vvi mtr ghi ghi bna sot cit nta nta
Symbol LOC100832010 LOC123189487 LOC123053589 LOC123426970 LOC4336112 LOC8058681 OTP86 LOC100777780 LOC101265961 LOC100853812 LOC11431268 LOC107915329 LOC107950887 LOC106396743 LOC102603734 LOC102617775 LOC107785013 LOC107791344
Function* pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu00860 Porphyrin metabolism 2
hvu01240 Biosynthesis of cofactors 2
hvu00300 Lysine biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100832010 123189487 123053589 123426970 4336112 8058681 825512 100777780 101265961 100853812 11431268 107915329 107950887 106396743 102603734 102617775 107785013 107791344
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