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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT4G10450   Ribosomal protein L6 family 
 ath-u.5   AT4G10450   Ribosomal protein L6 family 
 ath-r.7   AT4G10450   Ribosomal protein L6 family 
 ath-e.2   AT4G10450   Ribosomal protein L6 family 
 ath-m.4.bio   AT4G10450   Ribosomal protein L6 family 
 ath-m.4.hor   AT4G10450   Ribosomal protein L6 family 
 ath-m.4.lig   AT4G10450   Ribosomal protein L6 family 
 ath-m.4.str   AT4G10450   Ribosomal protein L6 family 
 ath-m.4.tis   AT4G10450   Ribosomal protein L6 family 
 ath-u.5   AT1G33120   Ribosomal protein L6 family 
 ath-u.5   PGY2   Ribosomal protein L6 family 
 bra-r.6   103853551   60S ribosomal protein L9-2 
 bra-r.6   103848821   60S ribosomal protein L9-1 
 bra-r.6   103848616   60S ribosomal protein L9-1 
 bna-r.1   125577890   60S ribosomal protein L9-1-like 
 bna-r.1   106381958   60S ribosomal protein L9-2-like 
 bna-r.1   106389950   60S ribosomal protein L9-1 
 ghi-r.1   107912018   60S ribosomal protein L9 
 ghi-r.1   107924631   60S ribosomal protein L9 
 ghi-r.1   107929586   60S ribosomal protein L9-1 
 cit-r.1   102631347   60S ribosomal protein L9-like 
 cit-r.1   102623433   60S ribosomal protein L9 
 cit-r.1   102619884   60S ribosomal protein L9 
 gma-u.5   100306058   60S ribosomal protein L9 
 gma-u.5   100810086   60S ribosomal protein L9-like 
 gma-u.5   100500079   uncharacterized LOC100500079 
 vvi-u.5   100252127   large ribosomal subunit protein uL6 
 vvi-u.5   100253227   large ribosomal subunit protein uL6 
 ppo-u.5   7490733   60S ribosomal protein L9 
 ppo-u.5   112325287   60S ribosomal protein L9-like 
 ppo-u.5   7455017   60S ribosomal protein L9 
 mtr-u.5   11405426   60S ribosomal protein L9 
 mtr-u.5   11419474   60S ribosomal protein L9 
 sly-u.5   101249254   large ribosomal subunit protein uL6z/uL6y 
 sly-u.5   101251592   large ribosomal subunit protein uL6z/uL6y 
 sly-u.5   101257196   large ribosomal subunit protein uL6z/uL6y 
 sot-r.1   102596885   60S ribosomal protein L9-1-like 
 sot-r.1   102599440   60S ribosomal protein L9-1-like 
 sot-r.1   102585829   60S ribosomal protein L9-1 
 nta-r.1   107819630   large ribosomal subunit protein uL6z/uL6y 
 nta-r.1   107813756   large ribosomal subunit protein uL6z/uL6y 
 nta-r.1   107802737   large ribosomal subunit protein uL6z/uL6y 
 osa-u.5   4347422   60S ribosomal protein L9-like 
 osa-u.5   4327999   large ribosomal subunit protein uL6-like 
 zma-u.5   100284304   60S ribosomal protein L9-like 
 zma-u.5   100283325   60S ribosomal protein L9-like 
 zma-u.5   100280993   60S ribosomal protein L9 
 tae-r.2   123068231   60S ribosomal protein L9 
 tae-r.2   123064314   60S ribosomal protein L9 
 tae-r.2   123059770   60S ribosomal protein L9 
 hvu-r.1   123410402   60S ribosomal protein L9 
 hvu-r.1   123442369   60S ribosomal protein L9 
 hvu-r.1   123442370   60S ribosomal protein L9 
 sbi-r.1   8067894   60S ribosomal protein L9 
 bdi-r.1   100833190   60S ribosomal protein L9 
 bdi-r.1   100834080   60S ribosomal protein L9 
 cre-r.1   CHLRE_12g494050v5   ribosomal protein L9 

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Top 50 coexpressed genes to AT4G10450 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G10450 (ath-m.9 coexpression data)

CoexMap"826637"


athAT4G10450 | Entrez gene ID : 826637      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 3 3 3 3 2 3 2 3 3 3 2 3 3 3 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (124 genes)  HDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_001328651.1 [sequence] [blastp]
NP_192783.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 1,  nucl 1,  extr 1,  E.R. 1,  golg 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001328651.1)
cyto 8,  nucl 1  (predict for NP_192783.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001328651.1)
other 9  (predict for NP_192783.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT4G10450
ath-u.5
for
AT4G10450
ath-r.7
for
AT4G10450
ath-e.2
for
AT4G10450
ath-m.4.bio
for
AT4G10450
ath-m.4.hor
for
AT4G10450
ath-m.4.lig
for
AT4G10450
ath-m.4.str
for
AT4G10450
ath-m.4.tis
for
AT4G10450
ath-u.5
for
AT1G33120
ath-u.5
for
PGY2
bra-r.6
for
103853551
bra-r.6
for
103848821
bra-r.6
for
103848616
bna-r.1
for
125577890
bna-r.1
for
106381958
bna-r.1
for
106389950
ghi-r.1
for
107912018
ghi-r.1
for
107924631
ghi-r.1
for
107929586
cit-r.1
for
102631347
cit-r.1
for
102623433
cit-r.1
for
102619884
gma-u.5
for
100306058
gma-u.5
for
100810086
gma-u.5
for
100500079
vvi-u.5
for
100252127
vvi-u.5
for
100253227
ppo-u.5
for
7490733
ppo-u.5
for
112325287
ppo-u.5
for
7455017
mtr-u.5
for
11405426
mtr-u.5
for
11419474
sly-u.5
for
101249254
sly-u.5
for
101251592
sly-u.5
for
101257196
sot-r.1
for
102596885
sot-r.1
for
102599440
sot-r.1
for
102585829
nta-r.1
for
107819630
nta-r.1
for
107813756
nta-r.1
for
107802737
osa-u.5
for
4347422
osa-u.5
for
4327999
zma-u.5
for
100284304
zma-u.5
for
100283325
zma-u.5
for
100280993
tae-r.2
for
123068231
tae-r.2
for
123064314
tae-r.2
for
123059770
hvu-r.1
for
123410402
hvu-r.1
for
123442369
hvu-r.1
for
123442370
sbi-r.1
for
8067894
bdi-r.1
for
100833190
bdi-r.1
for
100834080
cre-r.1
for
CHLRE_12g494050v5


Ortholog ID: 1585
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi bdi bdi cre
Symbol AT4G10450 AT1G33120 PGY2 LOC103848821 LOC103848616 LOC103838914 LOC106390118 LOC106399345 LOC106406948 LOC107950119 LOC107904536 LOC107944720 LOC102631347 LOC102623433 LOC102619884 LOC100810086 LOC100500079 LOC100810611 LOC100252127 LOC100253227 LOC112325287 LOC7455017 LOC7455012 LOC11405426 LOC11419474 LOC101249254 LOC101251592 LOC101257196 LOC102596885 LOC102599440 LOC102585829 LOC107819630 LOC107769103 LOC107767112 LOC4347422 LOC4327999 LOC100284304 LOC100283325 LOC100280993 LOC123068185 LOC123068189 LOC123164708 LOC123410402 LOC123442369 LOC123442370 LOC8067894 LOC100833190 LOC100834080 CHLRE_12g494050v5
Function* Ribosomal protein L6 family Ribosomal protein L6 family Ribosomal protein L6 family 60S ribosomal protein L9-1 60S ribosomal protein L9-1 60S ribosomal protein L9-2 60S ribosomal protein L9-2 60S ribosomal protein L9-2 60S ribosomal protein L9-1-like 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9-like 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9-like uncharacterized LOC100500079 60S ribosomal protein L9 large ribosomal subunit protein uL6 large ribosomal subunit protein uL6 60S ribosomal protein L9-like 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 large ribosomal subunit protein uL6z/uL6y large ribosomal subunit protein uL6z/uL6y large ribosomal subunit protein uL6z/uL6y 60S ribosomal protein L9-1-like 60S ribosomal protein L9-1-like 60S ribosomal protein L9-1 large ribosomal subunit protein uL6z/uL6y large ribosomal subunit protein uL6z/uL6y large ribosomal subunit protein uL6z/uL6y 60S ribosomal protein L9-like large ribosomal subunit protein uL6-like 60S ribosomal protein L9-like 60S ribosomal protein L9-like 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 ribosomal protein L9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
ath03008 Ribosome biogenesis in eukaryotes 4
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
gma01240 Biosynthesis of cofactors 2
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
nta03015 mRNA surveillance pathway 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
nta03015 mRNA surveillance pathway 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi00240 Pyrimidine metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826637 840208 840211 103848821 103848616 103838914 106390118 106399345 106406948 107950119 107904536 107944720 102631347 102623433 102619884 100810086 100500079 100810611 100252127 100253227 112325287 7455017 7455012 11405426 11419474 101249254 101251592 101257196 102596885 102599440 102585829 107819630 107769103 107767112 4347422 4327999 100284304 100283325 100280993 123068185 123068189 123164708 123410402 123442369 123442370 8067894 100833190 100834080 5726114
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