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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   FSD1   Fe superoxide dismutase 1 
 ath-u.5   FSD1   Fe superoxide dismutase 1 
 ath-r.7   FSD1   Fe superoxide dismutase 1 
 ath-e.2   FSD1   Fe superoxide dismutase 1 
 ath-m.4.bio   FSD1   Fe superoxide dismutase 1 
 ath-m.4.hor   FSD1   Fe superoxide dismutase 1 
 ath-m.4.lig   FSD1   Fe superoxide dismutase 1 
 ath-m.4.str   FSD1   Fe superoxide dismutase 1 
 ath-m.4.tis   FSD1   Fe superoxide dismutase 1 
 ath-u.5   FSD2   Fe superoxide dismutase 2 
 bra-r.6   FSD1   fibronectin type III and SPRY domain containing 1 
 bra-r.6   103857203   superoxide dismutase [Fe] 2, chloroplastic 
 bna-r.1   106411335   superoxide dismutase [Fe] 1, chloroplastic-like 
 bna-r.1   106442544   superoxide dismutase [Fe] 1, chloroplastic 
 bna-r.1   106346563   superoxide dismutase [Fe] 1, chloroplastic 
 ghi-r.1   107953603   superoxide dismutase [Fe], chloroplastic 
 ghi-r.1   107937992   superoxide dismutase [Fe], chloroplastic 
 cit-r.1   102612585   superoxide dismutase [Fe], chloroplastic-like 
 gma-u.5   SODB2   iron-superoxide dismutase 
 gma-u.5   SODB   Fe-superoxide dismutase 
 gma-u.5   100814802   superoxide dismutase [Fe], chloroplastic 
 vvi-u.5   100258067   superoxide dismutase [Fe], chloroplastic 
 ppo-u.5   7456676   superoxide dismutase [Fe], chloroplastic 
 ppo-u.5   18103839   superoxide dismutase [Fe], chloroplastic 
 mtr-u.5   25483199   superoxide dismutase [Fe], chloroplastic 
 sly-u.5   FESOD   iron superoxide dismutase 
 sly-u.5   101248277   superoxide dismutase [Fe], chloroplastic 
 sot-r.1   102577566   superoxide dismutase [Fe], chloroplastic 
 sot-r.1   102594810   superoxide dismutase [Fe], chloroplastic 
 sot-r.1   102588174   superoxide dismutase [Fe], chloroplastic-like 
 nta-r.1   107767307   superoxide dismutase [Fe], chloroplastic 
 nta-r.1   107800004   superoxide dismutase [Fe], chloroplastic 
 nta-r.1   107819573   superoxide dismutase [Fe], chloroplastic-like 
 osa-u.5   4339922   superoxide dismutase [Fe] 1, chloroplastic-like 
 zma-u.5   100274012   superoxide dismutase 
 tae-r.2   123151939   superoxide dismutase [Fe] 1, chloroplastic 
 sbi-r.1   8066912   superoxide dismutase [Fe] 1, chloroplastic 
 bdi-r.1   100838250   superoxide dismutase [Fe] 1, chloroplastic 
 cre-r.1   CHLRE_10g436050v5   uncharacterized protein 

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Top 50 coexpressed genes to FSD1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FSD1 (ath-m.9 coexpression data)

CoexMap"828613"


athFSD1 | Entrez gene ID : 828613      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae sbi bdi cre hvu
Paralog 10 2 3 2 1 3 1 2 1 2 3 3 1 1 1 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04146 [list] [network] Peroxisome (90 genes)
GO BP
GO:0019430 [list] [network] removal of superoxide radicals  (7 genes)  IC  
GO:0046688 [list] [network] response to copper ion  (27 genes)  IEP  
GO:0010193 [list] [network] response to ozone  (36 genes)  IEP  
GO:0046686 [list] [network] response to cadmium ion  (81 genes)  IEP  
GO:0007623 [list] [network] circadian rhythm  (124 genes)  IEP  
GO:0009642 [list] [network] response to light intensity  (168 genes)  IEP  
GO CC
GO:0009579 [list] [network] thylakoid  (507 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA RCA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA ISM NAS  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0004784 [list] [network] superoxide dismutase activity  (10 genes)  IDA IEA IMP  
GO:0005507 [list] [network] copper ion binding  (134 genes)  HDA  
Protein NP_001031710.1 [sequence] [blastp]
NP_001190834.1 [sequence] [blastp]
NP_194240.1 [sequence] [blastp]
NP_849440.1 [sequence] [blastp]
NP_849441.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 3,  nucl 3,  cyto 3,  nucl_plas 2  (predict for NP_001031710.1)
chlo 4,  cyto 3,  cyto_E.R. 2,  nucl 1,  nucl_plas 1  (predict for NP_001190834.1)
chlo 4,  cyto 3,  cyto_E.R. 2,  nucl 1,  nucl_plas 1  (predict for NP_194240.1)
chlo 4,  cyto 3,  cyto_E.R. 2,  nucl 1,  nucl_plas 1  (predict for NP_849440.1)
chlo 4,  cyto 3,  cyto_E.R. 2,  nucl 1,  nucl_plas 1  (predict for NP_849441.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031710.1)
other 4,  scret 4  (predict for NP_001190834.1)
other 4,  scret 4  (predict for NP_194240.1)
other 4,  scret 4  (predict for NP_849440.1)
other 4,  scret 4  (predict for NP_849441.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
FSD1
ath-u.5
for
FSD1
ath-r.7
for
FSD1
ath-e.2
for
FSD1
ath-m.4.bio
for
FSD1
ath-m.4.hor
for
FSD1
ath-m.4.lig
for
FSD1
ath-m.4.str
for
FSD1
ath-m.4.tis
for
FSD1
ath-u.5
for
FSD2
bra-r.6
for
FSD1
bra-r.6
for
103857203
bna-r.1
for
106411335
bna-r.1
for
106442544
bna-r.1
for
106346563
ghi-r.1
for
107953603
ghi-r.1
for
107937992
cit-r.1
for
102612585
gma-u.5
for
SODB2
gma-u.5
for
SODB
gma-u.5
for
100814802
vvi-u.5
for
100258067
ppo-u.5
for
7456676
ppo-u.5
for
18103839
mtr-u.5
for
25483199
sly-u.5
for
FESOD
sly-u.5
for
101248277
sot-r.1
for
102577566
sot-r.1
for
102594810
sot-r.1
for
102588174
nta-r.1
for
107767307
nta-r.1
for
107800004
nta-r.1
for
107819573
osa-u.5
for
4339922
zma-u.5
for
100274012
tae-r.2
for
123151939
sbi-r.1
for
8066912
bdi-r.1
for
100838250
cre-r.1
for
CHLRE_10g436050v5


Ortholog ID: 5809
Species ath ath bra bra bna bna bna ghi ghi cit gma gma gma vvi ppo ppo mtr sly sly sot sot sot nta nta nta osa zma tae sbi bdi cre
Symbol FSD1 FSD2 FSD1 LOC103857203 LOC106411335 LOC106442544 LOC106346563 LOC107953603 LOC107937992 LOC102612585 SODB2 LOC100814802 LOC100813221 LOC100258067 LOC7456676 LOC18103839 LOC25483199 FESOD LOC101248277 LOC102577566 LOC102594810 LOC102588174 LOC107767307 LOC107800004 LOC107819573 LOC4339922 LOC100274012 LOC123151939 LOC8066912 LOC100838250 CHLRE_10g436050v5
Function* Fe superoxide dismutase 1 Fe superoxide dismutase 2 fibronectin type III and SPRY domain containing 1 superoxide dismutase [Fe] 2, chloroplastic superoxide dismutase [Fe] 1, chloroplastic-like superoxide dismutase [Fe] 1, chloroplastic superoxide dismutase [Fe] 1, chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic-like iron-superoxide dismutase superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic iron superoxide dismutase superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic-like superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic-like superoxide dismutase [Fe] 1, chloroplastic-like superoxide dismutase superoxide dismutase [Fe] 1, chloroplastic superoxide dismutase [Fe] 1, chloroplastic superoxide dismutase [Fe] 1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 3
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
gma03010 Ribosome 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 4
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 4
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 4
nta00270 Cysteine and methionine metabolism 3
nta00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma04141 Protein processing in endoplasmic reticulum 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
cre00900 Terpenoid backbone biosynthesis 2
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre00660 C5-Branched dibasic acid metabolism 2
cre01210 2-Oxocarboxylic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828613 835183 103862899 103857203 106411335 106442544 106346563 107953603 107937992 102612585 547531 100814802 100813221 100258067 7456676 18103839 25483199 544259 101248277 102577566 102594810 102588174 107767307 107800004 107819573 4339922 100274012 123151939 8066912 100838250 5716112
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