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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G04050   RNA-directed DNA polymerase (reverse transcriptase) 
 ath-u.5   AT5G04050   RNA-directed DNA polymerase (reverse transcriptase) 
 ath-r.7   AT5G04050   RNA-directed DNA polymerase (reverse transcriptase) 
 ath-e.2   AT5G04050   RNA-directed DNA polymerase (reverse transcriptase) 
 ath-m.4.bio   AT5G04050   RNA-directed DNA polymerase (reverse transcriptase) 
 ath-m.4.hor   AT5G04050   RNA-directed DNA polymerase (reverse transcriptase) 
 ath-m.4.lig   AT5G04050   RNA-directed DNA polymerase (reverse transcriptase) 
 ath-m.4.str   AT5G04050   RNA-directed DNA polymerase (reverse transcriptase) 
 ath-m.4.tis   AT5G04050   RNA-directed DNA polymerase (reverse transcriptase) 
 bra-r.6   103847334   nuclear intron maturase 3, mitochondrial 
 bna-r.1   106372667   nuclear intron maturase 3, mitochondrial 
 bna-r.1   106372516   nuclear intron maturase 3, mitochondrial 
 ghi-r.1   107889395   nuclear intron maturase 3, mitochondrial-like 
 ghi-r.1   107892540   nuclear intron maturase 3, mitochondrial 
 cit-r.1   102607317   nuclear intron maturase 3, mitochondrial 
 gma-u.5   100812449   nuclear intron maturase 3, mitochondrial 
 gma-u.5   112999758   nuclear intron maturase 3, mitochondrial 
 vvi-u.5   100264128   nuclear intron maturase 3, mitochondrial 
 ppo-u.5   112327903   nuclear intron maturase 3, mitochondrial 
 mtr-u.5   112421304   nuclear intron maturase 3, mitochondrial 
 mtr-u.5   112422855   nuclear intron maturase 3, mitochondrial 
 sly-u.5   101246113   nuclear intron maturase 3, mitochondrial 
 sot-r.1   102587557   uncharacterized LOC102587557 
 nta-r.1   107766291   nuclear intron maturase 3, mitochondrial-like 
 nta-r.1   107800159   nuclear intron maturase 3, mitochondrial 
 zma-u.5   103629684   RNA-directed DNA polymerase (reverse transcriptase) 
 tae-r.2   123159924   nuclear intron maturase 3, mitochondrial 
 tae-r.2   123168959   nuclear intron maturase 3, mitochondrial 
 hvu-r.1   123412494   nuclear intron maturase 3, mitochondrial-like 
 hvu-r.1   123449772   nuclear intron maturase 3, mitochondrial-like 
 sbi-r.1   8069370   uncharacterized LOC8069370 
 bdi-r.1   100827431   nuclear intron maturase 3, mitochondrial 

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Top 50 coexpressed genes to AT5G04050 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G04050 (ath-m.9 coexpression data)

CoexMap"830284"


athAT5G04050 | Entrez gene ID : 830284      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta zma tae hvu sbi bdi osa cre
Paralog 9 1 2 2 1 2 1 1 2 1 1 2 1 2 2 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006397 [list] [network] mRNA processing  (185 genes)  IEA  
GO:0008380 [list] [network] RNA splicing  (195 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA ISM  
GO MF
Protein NP_001154695.1 [sequence] [blastp]
NP_196025.5 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1  (predict for NP_001154695.1)
chlo 4,  chlo_mito 4,  mito 3,  cyto_mito 1,  nucl 1  (predict for NP_196025.5)
Subcellular
localization
TargetP
mito 8  (predict for NP_001154695.1)
mito 8  (predict for NP_196025.5)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G04050
ath-u.5
for
AT5G04050
ath-r.7
for
AT5G04050
ath-e.2
for
AT5G04050
ath-m.4.bio
for
AT5G04050
ath-m.4.hor
for
AT5G04050
ath-m.4.lig
for
AT5G04050
ath-m.4.str
for
AT5G04050
ath-m.4.tis
for
AT5G04050
bra-r.6
for
103847334
bna-r.1
for
106372667
bna-r.1
for
106372516
ghi-r.1
for
107889395
ghi-r.1
for
107892540
cit-r.1
for
102607317
gma-u.5
for
100812449
gma-u.5
for
112999758
vvi-u.5
for
100264128
ppo-u.5
for
112327903
mtr-u.5
for
112421304
mtr-u.5
for
112422855
sly-u.5
for
101246113
sot-r.1
for
102587557
nta-r.1
for
107766291
nta-r.1
for
107800159
zma-u.5
for
103629684
tae-r.2
for
123159924
tae-r.2
for
123168959
hvu-r.1
for
123412494
hvu-r.1
for
123449772
sbi-r.1
for
8069370
bdi-r.1
for
100827431


Ortholog ID: 10271
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr mtr sly sot nta nta zma tae tae hvu hvu sbi bdi
Symbol AT5G04050 LOC103847334 LOC106372667 LOC106372516 LOC107889395 LOC107892540 LOC102607317 LOC100812449 LOC112999758 LOC100264128 LOC112327903 LOC112421304 LOC112422855 LOC101246113 LOC102587557 LOC107766291 LOC107800159 LOC103629684 LOC123159924 LOC123168959 LOC123412494 LOC123449772 LOC8069370 LOC100827431
Function* RNA-directed DNA polymerase (reverse transcriptase) nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial-like nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial uncharacterized LOC102587557 nuclear intron maturase 3, mitochondrial-like nuclear intron maturase 3, mitochondrial RNA-directed DNA polymerase (reverse transcriptase) nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial nuclear intron maturase 3, mitochondrial-like nuclear intron maturase 3, mitochondrial-like uncharacterized LOC8069370 nuclear intron maturase 3, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03440 Homologous recombination 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830284 103847334 106372667 106372516 107889395 107892540 102607317 100812449 112999758 100264128 112327903 112421304 112422855 101246113 102587557 107766291 107800159 103629684 123159924 123168959 123412494 123449772 8069370 100827431
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