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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G04600   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   AT5G04600   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-r.7   AT5G04600   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-e.2   AT5G04600   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.bio   AT5G04600   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.hor   AT5G04600   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.lig   AT5G04600   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.str   AT5G04600   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.tis   AT5G04600   RNA-binding (RRM/RBD/RNP motifs) family protein 
 bra-r.6   103850554   uncharacterized RNA-binding protein C1827.05c 
 bra-r.6   103847273   uncharacterized RNA-binding protein C1827.05c 
 bna-r.1   BNAC09G50690D   uncharacterized RNA-binding protein C1827.05c 
 bna-r.1   106425275   uncharacterized RNA-binding protein C1827.05c-like 
 bna-r.1   106372499   uncharacterized RNA-binding protein C1827.05c-like 
 ghi-r.1   107933250   uncharacterized RNA-binding protein C1827.05c 
 ghi-r.1   107918541   uncharacterized RNA-binding protein C1827.05c 
 cit-r.1   102608776   uncharacterized RNA-binding protein C1827.05c 
 gma-u.5   100778780   MKI67 FHA domain-interacting nucleolar phosphoprotein 
 gma-u.5   100814276   RNA recognition motif (RRM) superfamily protein 
 vvi-u.5   100255455   uncharacterized RNA-binding protein C1827.05c 
 ppo-u.5   7477188   uncharacterized RNA-binding protein C1827.05c 
 mtr-u.5   11425441   uncharacterized RNA-binding protein C1827.05c 
 mtr-u.5   11416225   uncharacterized RNA-binding protein C1827.05c 
 sly-u.5   101267087   uncharacterized RNA-binding protein C1827.05c 
 sly-u.5   101245260   uncharacterized RNA-binding protein C1827.05c 
 sot-r.1   102594986   uncharacterized LOC102594986 
 sot-r.1   102584284   uncharacterized RNA-binding protein C1827.05c-like 
 nta-r.1   107825723   putative RNA-binding protein C1827.05c 
 nta-r.1   107801373   putative RNA-binding protein C1827.05c 
 osa-u.5   4345558   uncharacterized LOC4345558 
 zma-u.5   100856944   MKI67 FHA domain-interacting nucleolar phosphoprotein-like 
 tae-r.2   123142957   MKI67 FHA domain-interacting nucleolar phosphoprotein 
 tae-r.2   123188037   MKI67 FHA domain-interacting nucleolar phosphoprotein 
 tae-r.2   123044299   MKI67 FHA domain-interacting nucleolar phosphoprotein 
 hvu-r.1   123402757   MKI67 FHA domain-interacting nucleolar phosphoprotein 
 hvu-r.1   123425428   MKI67 FHA domain-interacting nucleolar phosphoprotein-like 
 sbi-r.1   110433349   MKI67 FHA domain-interacting nucleolar phosphoprotein 
 bdi-r.1   100838203   MKI67 FHA domain-interacting nucleolar phosphoprotein 
 cre-r.1   CHLRE_08g368500v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G04600 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G04600 (ath-m.9 coexpression data)

CoexMap"830337"


athAT5G04600 | Entrez gene ID : 830337      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 1 2 2 2 2 1 1 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034337 [list] [network] RNA folding  (4 genes)  IDA  
GO CC
GO:0005730 [list] [network] nucleolus  (394 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0140691 [list] [network] RNA folding chaperone  (8 genes)  IDA  
Protein NP_196080.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1  (predict for NP_196080.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_196080.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G04600
ath-u.5
for
AT5G04600
ath-r.7
for
AT5G04600
ath-e.2
for
AT5G04600
ath-m.4.bio
for
AT5G04600
ath-m.4.hor
for
AT5G04600
ath-m.4.lig
for
AT5G04600
ath-m.4.str
for
AT5G04600
ath-m.4.tis
for
AT5G04600
bra-r.6
for
103850554
bra-r.6
for
103847273
bna-r.1
for
BNAC09G50690D
bna-r.1
for
106425275
bna-r.1
for
106372499
ghi-r.1
for
107933250
ghi-r.1
for
107918541
cit-r.1
for
102608776
gma-u.5
for
100778780
gma-u.5
for
100814276
vvi-u.5
for
100255455
ppo-u.5
for
7477188
mtr-u.5
for
11425441
mtr-u.5
for
11416225
sly-u.5
for
101267087
sly-u.5
for
101245260
sot-r.1
for
102594986
sot-r.1
for
102584284
nta-r.1
for
107825723
nta-r.1
for
107801373
osa-u.5
for
4345558
zma-u.5
for
100856944
tae-r.2
for
123142957
tae-r.2
for
123188037
tae-r.2
for
123044299
hvu-r.1
for
123402757
hvu-r.1
for
123425428
sbi-r.1
for
110433349
bdi-r.1
for
100838203
cre-r.1
for
CHLRE_08g368500v5


Ortholog ID: 6066
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr mtr sly sly sot sot nta nta osa zma tae tae tae hvu hvu sbi bdi cre
Symbol AT5G04600 LOC103850554 LOC103847273 BNAC09G50690D LOC106425275 LOC106372499 LOC107933250 LOC107918541 LOC102608776 LOC100778780 LOC100814276 LOC100255455 LOC7477188 LOC11425441 LOC11416225 LOC101267087 LOC101245260 LOC102594986 LOC102584284 LOC107825723 LOC107801373 LOC4345558 LOC100856944 LOC123142957 LOC123188037 LOC123049045 LOC123402757 LOC123425428 LOC110433349 LOC100838203 CHLRE_08g368500v5
Function* RNA-binding (RRM/RBD/RNP motifs) family protein uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c-like uncharacterized RNA-binding protein C1827.05c-like uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c MKI67 FHA domain-interacting nucleolar phosphoprotein RNA recognition motif (RRM) superfamily protein uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized LOC102594986 uncharacterized RNA-binding protein C1827.05c-like putative RNA-binding protein C1827.05c putative RNA-binding protein C1827.05c uncharacterized LOC4345558 MKI67 FHA domain-interacting nucleolar phosphoprotein-like MKI67 FHA domain-interacting nucleolar phosphoprotein MKI67 FHA domain-interacting nucleolar phosphoprotein MKI67 FHA domain-interacting nucleolar phosphoprotein MKI67 FHA domain-interacting nucleolar phosphoprotein MKI67 FHA domain-interacting nucleolar phosphoprotein-like MKI67 FHA domain-interacting nucleolar phosphoprotein MKI67 FHA domain-interacting nucleolar phosphoprotein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03008 Ribosome biogenesis in eukaryotes 2
bra00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03082 ATP-dependent chromatin remodeling 2
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03082 ATP-dependent chromatin remodeling 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03010 Ribosome 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi03040 Spliceosome 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03010 Ribosome 3
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta04120 Ubiquitin mediated proteolysis 3
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03008 Ribosome biogenesis in eukaryotes 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830337 103850554 103847273 106433121 106425275 106372499 107933250 107918541 102608776 100778780 100814276 100255455 7477188 11425441 11416225 101267087 101245260 102594986 102584284 107825723 107801373 4345558 100856944 123142957 123188037 123049045 123402757 123425428 110433349 100838203 5721707
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