Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7477188   uncharacterized RNA-binding protein C1827.05c 
 ppo-r.4   7477188   uncharacterized RNA-binding protein C1827.05c 
 ppo-m.4   7477188   uncharacterized RNA-binding protein C1827.05c 
 gma-u.5   100778780   MKI67 FHA domain-interacting nucleolar phosphoprotein 
 gma-u.5   100814276   RNA recognition motif (RRM) superfamily protein 
 mtr-u.5   11425441   uncharacterized RNA-binding protein C1827.05c 
 mtr-u.5   11416225   uncharacterized RNA-binding protein C1827.05c 
 ath-u.5   AT5G04600   RNA-binding (RRM/RBD/RNP motifs) family protein 
 vvi-u.5   100255455   uncharacterized RNA-binding protein C1827.05c 
 sly-u.5   101267087   uncharacterized RNA-binding protein C1827.05c 
 sly-u.5   101245260   uncharacterized RNA-binding protein C1827.05c 
 osa-u.5   4345558   uncharacterized LOC4345558 
 zma-u.5   100856944   MKI67 FHA domain-interacting nucleolar phosphoprotein-like 

close


Top 50 coexpressed genes to 7477188 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7477188 (ppo-u.5 coexpression data)

CoexMap"7477188"


ppoLOC7477188 | Entrez gene ID : 7477188    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (21 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (220 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_024466964.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  plas 1,  pero 1,  cyto_E.R. 1  (predict for XP_024466964.1)
Subcellular
localization
TargetP
scret 2  (predict for XP_024466964.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7477188

.
ppo-r.4
for
7477188

.
ppo-m.4
for
7477188

.
gma-u.5
for
100778780

.
gma-u.5
for
100814276

.
mtr-u.5
for
11425441

.
mtr-u.5
for
11416225

.
ath-u.5
for
AT5G04600

.
vvi-u.5
for
100255455

.
sly-u.5
for
101267087

.
sly-u.5
for
101245260

.
osa-u.5
for
4345558

.
zma-u.5
for
100856944

.


Ortholog ID: 6066
Species ath gma gma sly sly osa zma bra bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT5G04600 LOC100778780 LOC100814276 LOC101245260 LOC101267087 LOC4345558 LOC100856944 LOC103850554 LOC103847273 LOC100255455 LOC7477188 LOC11416225 LOC11425441 LOC123142957 LOC123188037 LOC123402757 LOC123425428 LOC107933250 LOC107918541 BNAC09G50690D LOC106372499 CHLRE_08g368500v5 LOC110433349 LOC102594986 LOC102584284 LOC102608776 LOC100838203 LOC107801373 LOC107825723
Function* RNA-binding (RRM/RBD/RNP motifs) family protein MKI67 FHA domain-interacting nucleolar phosphoprotein RNA recognition motif (RRM) superfamily protein uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized LOC4345558 MKI67 FHA domain-interacting nucleolar phosphoprotein-like uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c MKI67 FHA domain-interacting nucleolar phosphoprotein MKI67 FHA domain-interacting nucleolar phosphoprotein MKI67 FHA domain-interacting nucleolar phosphoprotein MKI67 FHA domain-interacting nucleolar phosphoprotein-like uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c uncharacterized RNA-binding protein C1827.05c-like uncharacterized protein MKI67 FHA domain-interacting nucleolar phosphoprotein uncharacterized LOC102594986 uncharacterized RNA-binding protein C1827.05c-like uncharacterized RNA-binding protein C1827.05c MKI67 FHA domain-interacting nucleolar phosphoprotein putative RNA-binding protein C1827.05c putative RNA-binding protein C1827.05c
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03010 Ribosome 3
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03008 Ribosome biogenesis in eukaryotes 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03008 Ribosome biogenesis in eukaryotes 2
bra00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi03040 Spliceosome 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03082 ATP-dependent chromatin remodeling 2
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03010 Ribosome 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta04120 Ubiquitin mediated proteolysis 3
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830337 100778780 100814276 101245260 101267087 4345558 100856944 103850554 103847273 100255455 7477188 11416225 11425441 123142957 123188037 123402757 123425428 107933250 107918541 106433121 106372499 5721707 110433349 102594986 102584284 102608776 100838203 107801373 107825723
The preparation time of this page was 0.1 [sec].