ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT5G17370	Transducin/WD40 repeat-like superfamily protein
ath-u.5	AT5G17370	Transducin/WD40 repeat-like superfamily protein
ath-r.7	AT5G17370	Transducin/WD40 repeat-like superfamily protein
ath-e.2	AT5G17370	Transducin/WD40 repeat-like superfamily protein
ath-m.4.bio	AT5G17370	Transducin/WD40 repeat-like superfamily protein
ath-m.4.hor	AT5G17370	Transducin/WD40 repeat-like superfamily protein
ath-m.4.lig	AT5G17370	Transducin/WD40 repeat-like superfamily protein
ath-m.4.str	AT5G17370	Transducin/WD40 repeat-like superfamily protein
ath-m.4.tis	AT5G17370	Transducin/WD40 repeat-like superfamily protein
bra-r.6	103851104	uncharacterized LOC103851104
bna-r.1	106349381	DDB1- and CUL4-associated factor 4
bna-r.1	106354415	DDB1- and CUL4-associated factor 4-like
ghi-r.1	107941888	DDB1- and CUL4-associated factor 4
ghi-r.1	107922745	DDB1- and CUL4-associated factor 4
cit-r.1	102613228	uncharacterized LOC102613228
gma-u.5	100797740	DDB1- and CUL4-associated factor 4
gma-u.5	100798753	DDB1- and CUL4-associated factor 4
vvi-u.5	100266712	uncharacterized LOC100266712
ppo-u.5	7477784	uncharacterized LOC7477784
mtr-u.5	25488205	uncharacterized LOC25488205
sly-u.5	101252105	WD repeat-containing protein 21
sot-r.1	102599554	DDB1- and CUL4-associated factor 4
nta-r.1	107832506	uncharacterized LOC107832506
nta-r.1	107761923	uncharacterized LOC107761923
osa-u.5	4342207	uncharacterized LOC4342207
zma-u.5	100277954	uncharacterized LOC100277954
tae-r.2	123052943	DDB1- and CUL4-associated factor 4
tae-r.2	123188855	DDB1- and CUL4-associated factor 4
tae-r.2	123045107	DDB1- and CUL4-associated factor 4
hvu-r.1	123426352	DDB1- and CUL4-associated factor 4
sbi-r.1	8081601	DDB1- and CUL4-associated factor 4
bdi-r.1	100843698	uncharacterized LOC100843698

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex	(121 genes)	ISS
GO:0005634 [list] [network] nucleus	(10367 genes)	ISM

GO MF

Protein

NP_001318582.1 [sequence] [blastp]
NP_001330573.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 4	(predict for NP_001318582.1)
cyto 3, vacu 2, golg 2, cyto_nucl 2	(predict for NP_001330573.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001318582.1)
other 8	(predict for NP_001330573.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT5G17370	ath-u.5 for AT5G17370	ath-r.7 for AT5G17370	ath-e.2 for AT5G17370	ath-m.4.bio for AT5G17370	ath-m.4.hor for AT5G17370	ath-m.4.lig for AT5G17370	ath-m.4.str for AT5G17370	ath-m.4.tis for AT5G17370	bra-r.6 for 103851104	bna-r.1 for 106349381	bna-r.1 for 106354415	ghi-r.1 for 107941888	ghi-r.1 for 107922745	cit-r.1 for 102613228	gma-u.5 for 100797740	gma-u.5 for 100798753	vvi-u.5 for 100266712	ppo-u.5 for 7477784	mtr-u.5 for 25488205	sly-u.5 for 101252105	sot-r.1 for 102599554	nta-r.1 for 107832506	nta-r.1 for 107761923	osa-u.5 for 4342207	zma-u.5 for 100277954	tae-r.2 for 123052943	tae-r.2 for 123188855	tae-r.2 for 123045107	hvu-r.1 for 123426352	sbi-r.1 for 8081601	bdi-r.1 for 100843698

Ortholog

Ortholog ID: 9671

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

Transducin/WD40 repeat-like superfamily protein

uncharacterized LOC103851104