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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G17370   Transducin/WD40 repeat-like superfamily protein 
 ath-r.7   AT5G17370   Transducin/WD40 repeat-like superfamily protein 
 ath-m.9   AT5G17370   Transducin/WD40 repeat-like superfamily protein 
 ath-e.2   AT5G17370   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.bio   AT5G17370   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.hor   AT5G17370   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.lig   AT5G17370   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.str   AT5G17370   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.tis   AT5G17370   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100797740   DDB1- and CUL4-associated factor 4 
 gma-u.5   100798753   DDB1- and CUL4-associated factor 4 
 vvi-u.5   100266712   uncharacterized LOC100266712 
 ppo-u.5   7477784   uncharacterized LOC7477784 
 mtr-u.5   25488205   uncharacterized LOC25488205 
 sly-u.5   101252105   WD repeat-containing protein 21 
 osa-u.5   4342207   uncharacterized LOC4342207 
 zma-u.5   100277954   uncharacterized LOC100277954 

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Top 50 coexpressed genes to AT5G17370 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G17370 (ath-u.5 coexpression data)

CoexMap"831603"


athAT5G17370 | Entrez gene ID : 831603      
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001318582.1 [sequence] [blastp]
NP_001330573.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for NP_001318582.1)
cyto 3,  vacu 2,  golg 2,  cyto_nucl 2  (predict for NP_001330573.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001318582.1)
other 8  (predict for NP_001330573.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G17370

.
ath-r.7
for
AT5G17370

.
ath-m.9
for
AT5G17370

.
ath-e.2
for
AT5G17370

.
ath-m.4.bio
for
AT5G17370

.
ath-m.4.hor
for
AT5G17370

.
ath-m.4.lig
for
AT5G17370

.
ath-m.4.str
for
AT5G17370

.
ath-m.4.tis
for
AT5G17370

.
gma-u.5
for
100797740

.
gma-u.5
for
100798753

.
vvi-u.5
for
100266712

.
ppo-u.5
for
7477784

.
mtr-u.5
for
25488205

.
sly-u.5
for
101252105

.
osa-u.5
for
4342207

.
zma-u.5
for
100277954

.


Ortholog ID: 9671
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G17370 LOC100798753 LOC100797740 LOC101252105 LOC4342207 LOC100277954 LOC103851104 LOC100266712 LOC7477784 LOC25488205 LOC123188855 LOC123052943 LOC123426352 LOC107941888 LOC107922745 LOC106349381 LOC106354415 LOC8081601 LOC102599554 LOC102613228 LOC100843698 LOC107761923 LOC107832506
Function* Transducin/WD40 repeat-like superfamily protein DDB1- and CUL4-associated factor 4 DDB1- and CUL4-associated factor 4 WD repeat-containing protein 21 uncharacterized LOC4342207 uncharacterized LOC100277954 uncharacterized LOC103851104 uncharacterized LOC100266712 uncharacterized LOC7477784 uncharacterized LOC25488205 DDB1- and CUL4-associated factor 4 DDB1- and CUL4-associated factor 4 DDB1- and CUL4-associated factor 4 DDB1- and CUL4-associated factor 4 DDB1- and CUL4-associated factor 4 DDB1- and CUL4-associated factor 4 DDB1- and CUL4-associated factor 4-like DDB1- and CUL4-associated factor 4 DDB1- and CUL4-associated factor 4 uncharacterized LOC102613228 uncharacterized LOC100843698 uncharacterized LOC107761923 uncharacterized LOC107832506
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00910 Nitrogen metabolism 2
gma01200 Carbon metabolism 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00220 Arginine biosynthesis 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00910 Nitrogen metabolism 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
ppo03020 RNA polymerase 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831603 100798753 100797740 101252105 4342207 100277954 103851104 100266712 7477784 25488205 123188855 123052943 123426352 107941888 107922745 106349381 106354415 8081601 102599554 102613228 100843698 107761923 107832506
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