ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100266712	uncharacterized LOC100266712
vvi-r.5	100266712	uncharacterized LOC100266712
ath-u.5	AT5G17370	Transducin/WD40 repeat-like superfamily protein
gma-u.5	100798753	DDB1- and CUL4-associated factor 4
gma-u.5	100797740	DDB1- and CUL4-associated factor 4
ppo-u.5	7477784	uncharacterized LOC7477784
mtr-u.5	25488205	uncharacterized LOC25488205
sly-u.5	101252105	WD repeat-containing protein 21
osa-u.5	4342207	uncharacterized LOC4342207
zma-u.5	100277954	uncharacterized LOC100277954

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4232 genes)

IEA

Protein

XP_059592271.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto 2

(predict for XP_059592271.1)

Subcellular
localization
TargetP

chlo 5, other 5

(predict for XP_059592271.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100266712	vvi-r.5 for 100266712	ath-u.5 for AT5G17370	gma-u.5 for 100798753	gma-u.5 for 100797740	ppo-u.5 for 7477784	mtr-u.5 for 25488205	sly-u.5 for 101252105	osa-u.5 for 4342207	zma-u.5 for 100277954

Ortholog ID: 9671

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100266712

Transducin/WD40 repeat-like superfamily protein

DDB1- and CUL4-associated factor 4

uncharacterized LOC103851104

uncharacterized LOC7477784

uncharacterized LOC25488205

DDB1- and CUL4-associated factor 4

DDB1- and CUL4-associated factor 4-like

uncharacterized LOC102613228

WD repeat-containing protein 21

DDB1- and CUL4-associated factor 4

uncharacterized LOC107761923

uncharacterized LOC107832506

uncharacterized LOC4342207

uncharacterized LOC100277954

DDB1- and CUL4-associated factor 4

uncharacterized LOC100843698

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00220	Arginine biosynthesis	2
gma00250	Alanine, aspartate and glutamate metabolism	2
gma00910	Nitrogen metabolism	2
gma01200	Carbon metabolism	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	4
gma00220	Arginine biosynthesis	2
gma00250	Alanine, aspartate and glutamate metabolism	2
gma00910	Nitrogen metabolism	2
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	4
ppo03020	RNA polymerase	2
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	2

Expression

Expression pattern

Entrez Gene ID^*

100266712

831603

100798753

100797740

103851104

7477784

25488205

107941888

107922745

106349381

106354415

102613228

101252105

102599554

107761923

107832506

4342207

100277954

123188855

123052943

123426352

8081601

100843698

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100266712 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100266712 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	1	2	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100266712 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100266712 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**