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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G02590   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT5G02590   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-r.7   AT5G02590   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-e.2   AT5G02590   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   AT5G02590   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   AT5G02590   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   AT5G02590   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   AT5G02590   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   AT5G02590   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT2G37400   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT3G53560   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103865595   protein SLOW GREEN 1, chloroplastic 
 bra-r.6   103857677   protein SLOW GREEN 1, chloroplastic 
 bra-r.6   103855512   protein SLOW GREEN 1, chloroplastic 
 bna-r.1   106448726   protein SLOW GREEN 1, chloroplastic-like 
 bna-r.1   106447377   protein SLOW GREEN 1, chloroplastic 
 bna-r.1   106428960   protein SLOW GREEN 1, chloroplastic-like 
 ghi-r.1   107899275   protein SLOW GREEN 1, chloroplastic 
 ghi-r.1   107948871   protein SLOW GREEN 1, chloroplastic 
 ghi-r.1   107920254   protein SLOW GREEN 1, chloroplastic 
 cit-r.1   102617396   protein SLOW GREEN 1, chloroplastic-like 
 gma-u.5   100778644   protein SLOW GREEN 1, chloroplastic 
 gma-u.5   102661172   protein SLOW GREEN 1, chloroplastic 
 vvi-u.5   100267054   protein SLOW GREEN 1, chloroplastic 
 ppo-u.5   7491946   protein SLOW GREEN 1, chloroplastic 
 ppo-u.5   7467582   protein SLOW GREEN 1, chloroplastic 
 mtr-u.5   25499302   protein SLOW GREEN 1, chloroplastic 
 sly-u.5   101245980   protein SLOW GREEN 1, chloroplastic 
 sot-r.1   102590982   protein SLOW GREEN 1, chloroplastic 
 sot-r.1   102599314   protein SLOW GREEN 1, chloroplastic-like 
 nta-r.1   107771396   protein SLOW GREEN 1, chloroplastic 
 nta-r.1   107796787   protein SLOW GREEN 1, chloroplastic-like 

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Top 50 coexpressed genes to AT5G02590 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G02590 (ath-m.9 coexpression data)

CoexMap"831857"


athAT5G02590 | Entrez gene ID : 831857      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa hvu tae cre zma bdi sbi
Paralog 11 3 3 3 1 2 1 2 1 1 2 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO MF
Protein NP_568104.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3,  nucl_plas 2  (predict for NP_568104.1)
Subcellular
localization
TargetP
chlo 2  (predict for NP_568104.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G02590
ath-u.5
for
AT5G02590
ath-r.7
for
AT5G02590
ath-e.2
for
AT5G02590
ath-m.4.bio
for
AT5G02590
ath-m.4.hor
for
AT5G02590
ath-m.4.lig
for
AT5G02590
ath-m.4.str
for
AT5G02590
ath-m.4.tis
for
AT5G02590
ath-u.5
for
AT2G37400
ath-u.5
for
AT3G53560
bra-r.6
for
103865595
bra-r.6
for
103857677
bra-r.6
for
103855512
bna-r.1
for
106448726
bna-r.1
for
106447377
bna-r.1
for
106428960
ghi-r.1
for
107899275
ghi-r.1
for
107948871
ghi-r.1
for
107920254
cit-r.1
for
102617396
gma-u.5
for
100778644
gma-u.5
for
102661172
vvi-u.5
for
100267054
ppo-u.5
for
7491946
ppo-u.5
for
7467582
mtr-u.5
for
25499302
sly-u.5
for
101245980
sot-r.1
for
102590982
sot-r.1
for
102599314
nta-r.1
for
107771396
nta-r.1
for
107796787


Ortholog ID: 7178
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot sot nta nta
Symbol AT5G02590 AT2G37400 AT3G53560 LOC103857677 LOC103855512 LOC103829939 LOC106447377 LOC106428960 LOC106383669 LOC107948871 LOC107920254 LOC107925631 LOC102617396 LOC100778644 LOC102661172 LOC100267054 LOC7491946 LOC7467582 LOC25499302 LOC101245980 LOC102590982 LOC102599314 LOC107771396 LOC107796787
Function* Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic-like protein SLOW GREEN 1, chloroplastic-like protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic-like protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic-like protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00220 Arginine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra00220 Arginine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna03008 Ribosome biogenesis in eukaryotes 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00300 Lysine biosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
gma00220 Arginine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 3
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831857 818316 824524 103857677 103855512 103829939 106447377 106428960 106383669 107948871 107920254 107925631 102617396 100778644 102661172 100267054 7491946 7467582 25499302 101245980 102590982 102599314 107771396 107796787
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