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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102599314   protein SLOW GREEN 1, chloroplastic-like 
 sot-r.1   102590982   protein SLOW GREEN 1, chloroplastic 
 sly-u.5   101245980   protein SLOW GREEN 1, chloroplastic 
 nta-r.1   107771396   protein SLOW GREEN 1, chloroplastic 
 nta-r.1   107796787   protein SLOW GREEN 1, chloroplastic-like 
 ath-u.5   AT2G37400   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT3G53560   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT5G02590   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100778644   protein SLOW GREEN 1, chloroplastic 
 gma-u.5   102661172   protein SLOW GREEN 1, chloroplastic 
 bra-r.6   103857677   protein SLOW GREEN 1, chloroplastic 
 bra-r.6   103829939   protein SLOW GREEN 1, chloroplastic 
 bra-r.6   103865595   protein SLOW GREEN 1, chloroplastic 
 vvi-u.5   100267054   protein SLOW GREEN 1, chloroplastic 
 ppo-u.5   7467582   protein SLOW GREEN 1, chloroplastic 
 ppo-u.5   7491946   protein SLOW GREEN 1, chloroplastic 
 mtr-u.5   25499302   protein SLOW GREEN 1, chloroplastic 
 ghi-r.1   107899275   protein SLOW GREEN 1, chloroplastic 
 ghi-r.1   107920254   protein SLOW GREEN 1, chloroplastic 
 ghi-r.1   107948871   protein SLOW GREEN 1, chloroplastic 
 bna-r.1   106448726   protein SLOW GREEN 1, chloroplastic-like 
 bna-r.1   106447377   protein SLOW GREEN 1, chloroplastic 
 bna-r.1   106428960   protein SLOW GREEN 1, chloroplastic-like 
 cit-r.1   102617396   protein SLOW GREEN 1, chloroplastic-like 

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Top 50 coexpressed genes to 102599314 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102599314 (sot-r.1 coexpression data)

CoexMap"102599314"


sotLOC102599314 | Entrez gene ID : 102599314    
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa bdi tae zma sbi hvu cre
Paralog 2 1 2 3 2 3 1 2 1 3 3 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (97 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006339040.1 [sequence] [blastp]
XP_006339041.1 [sequence] [blastp]
XP_006339042.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1  (predict for XP_006339040.1)
chlo 9,  nucl 1  (predict for XP_006339041.1)
chlo 9,  nucl 1  (predict for XP_006339042.1)
Subcellular
localization
TargetP
chlo 6,  other 3  (predict for XP_006339040.1)
chlo 6,  other 3  (predict for XP_006339041.1)
chlo 6,  other 3  (predict for XP_006339042.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102599314
sot-r.1
for
102590982
sly-u.5
for
101245980
nta-r.1
for
107771396
nta-r.1
for
107796787
ath-u.5
for
AT2G37400
ath-u.5
for
AT3G53560
ath-u.5
for
AT5G02590
gma-u.5
for
100778644
gma-u.5
for
102661172
bra-r.6
for
103857677
bra-r.6
for
103829939
bra-r.6
for
103865595
vvi-u.5
for
100267054
ppo-u.5
for
7467582
ppo-u.5
for
7491946
mtr-u.5
for
25499302
ghi-r.1
for
107899275
ghi-r.1
for
107920254
ghi-r.1
for
107948871
bna-r.1
for
106448726
bna-r.1
for
106447377
bna-r.1
for
106428960
cit-r.1
for
102617396


Ortholog ID: 7178
Species sot sot sly nta nta ath ath ath gma gma bra bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna cit
Symbol LOC102599314 LOC102590982 LOC101245980 LOC107771396 LOC107796787 AT2G37400 AT3G53560 AT5G02590 LOC100778644 LOC102661172 LOC103857677 LOC103829939 LOC103855512 LOC100267054 LOC7467582 LOC7491946 LOC25499302 LOC107920254 LOC107948871 LOC107925631 LOC106447377 LOC106428960 LOC106383669 LOC102617396
Function* protein SLOW GREEN 1, chloroplastic-like protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic-like Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic-like protein SLOW GREEN 1, chloroplastic-like protein SLOW GREEN 1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
gma00220 Arginine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00220 Arginine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra00220 Arginine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 3
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna03008 Ribosome biogenesis in eukaryotes 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00300 Lysine biosynthesis 2
cit01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102599314 102590982 101245980 107771396 107796787 818316 824524 831857 100778644 102661172 103857677 103829939 103855512 100267054 7467582 7491946 25499302 107920254 107948871 107925631 106447377 106428960 106383669 102617396
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