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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102590982   protein SLOW GREEN 1, chloroplastic 
 sly-u.5   101245980   protein SLOW GREEN 1, chloroplastic 
 ath-u.5   AT2G37400   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT3G53560   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT5G02590   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100778644   protein SLOW GREEN 1, chloroplastic 
 gma-u.5   102661172   protein SLOW GREEN 1, chloroplastic 
 vvi-u.5   100267054   protein SLOW GREEN 1, chloroplastic 
 ppo-u.5   7467582   protein SLOW GREEN 1, chloroplastic 
 ppo-u.5   7491946   protein SLOW GREEN 1, chloroplastic 
 mtr-u.5   25499302   protein SLOW GREEN 1, chloroplastic 

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Top 50 coexpressed genes to 102590982 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102590982 (sot-r.1 coexpression data)

CoexMap"102590982"


sotLOC102590982 | Entrez gene ID : 102590982      
Species sot sly ath gma vvi ppo mtr sbi nta bra osa cre cit hvu bdi zma tae bna ghi
Paralog 1 1 3 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (97 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_015163475.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for XP_015163475.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_015163475.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102590982

.
sly-u.5
for
101245980

.
ath-u.5
for
AT2G37400

.
ath-u.5
for
AT3G53560

.
ath-u.5
for
AT5G02590

.
gma-u.5
for
100778644

.
gma-u.5
for
102661172

.
vvi-u.5
for
100267054

.
ppo-u.5
for
7467582

.
ppo-u.5
for
7491946

.
mtr-u.5
for
25499302

.


Ortholog ID: 7178
Species ath ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna sot sot cit nta nta
Symbol AT5G02590 AT2G37400 LOC102661172 LOC100778644 LOC101245980 LOC103857677 LOC103855512 LOC100267054 LOC7467582 LOC7491946 LOC25499302 LOC107948871 LOC107920254 LOC106447377 LOC106428960 LOC102590982 LOC102599314 LOC102617396 LOC107771396 LOC107796787
Function* Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic-like protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic-like protein SLOW GREEN 1, chloroplastic-like protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
gma00220 Arginine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00220 Arginine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra00220 Arginine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 3
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna03008 Ribosome biogenesis in eukaryotes 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00300 Lysine biosynthesis 2
cit01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831857 818316 102661172 100778644 101245980 103857677 103855512 100267054 7467582 7491946 25499302 107948871 107920254 106447377 106428960 102590982 102599314 102617396 107771396 107796787
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