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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G19420   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-u.5   AT5G19420   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-r.7   AT5G19420   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-e.2   AT5G19420   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-m.4.bio   AT5G19420   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-m.4.hor   AT5G19420   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-m.4.lig   AT5G19420   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-m.4.str   AT5G19420   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-m.4.tis   AT5G19420   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-u.5   AT5G12350   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-u.5   AT1G65920   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 bra-r.6   103856379   PH, RCC1 and FYVE domains-containing protein 1 
 bra-r.6   103846644   PH, RCC1 and FYVE domains-containing protein 1 
 bra-r.6   103849089   PH, RCC1 and FYVE domains-containing protein 1 
 bna-r.1   106434266   PH, RCC1 and FYVE domains-containing protein 1-like 
 bna-r.1   106372363   PH, RCC1 and FYVE domains-containing protein 1 
 ghi-r.1   107895189   PH, RCC1 and FYVE domains-containing protein 1 
 ghi-r.1   107912868   PH, RCC1 and FYVE domains-containing protein 1 
 ghi-r.1   107915135   PH, RCC1 and FYVE domains-containing protein 1 
 cit-r.1   102612328   PH, RCC1 and FYVE domains-containing protein 1 
 cit-r.1   102623335   PH, RCC1 and FYVE domains-containing protein 1 
 cit-r.1   102623949   PH, RCC1 and FYVE domains-containing protein 1 
 gma-u.5   100806439   PH, RCC1 and FYVE domains-containing protein 1 
 gma-u.5   100797527   PH, RCC1 and FYVE domains-containing protein 1 
 gma-u.5   100802464   PH, RCC1 and FYVE domains-containing protein 1 
 vvi-u.5   100253065   PH, RCC1 and FYVE domains-containing protein 1 
 vvi-u.5   100243300   PH, RCC1 and FYVE domains-containing protein 1 
 vvi-u.5   100250008   PH, RCC1 and FYVE domains-containing protein 1 
 ppo-u.5   7496775   PH, RCC1 and FYVE domains-containing protein 1 
 ppo-u.5   18106548   PH, RCC1 and FYVE domains-containing protein 1 
 mtr-u.5   112419908   PH, RCC1 and FYVE domains-containing protein 1 
 mtr-u.5   112417506   PH, RCC1 and FYVE domains-containing protein 1 
 mtr-u.5   11425815   PH, RCC1 and FYVE domains-containing protein 1 
 sly-u.5   101256573   PH, RCC1 and FYVE domains-containing protein 1 
 sly-u.5   101257851   PH, RCC1 and FYVE domains-containing protein 1 
 sot-r.1   102588539   uncharacterized LOC102588539 
 sot-r.1   102590844   uncharacterized LOC102590844 
 nta-r.1   107782649   PH, RCC1 and FYVE domains-containing protein 1-like 
 nta-r.1   107796116   PH, RCC1 and FYVE domains-containing protein 1-like 
 osa-u.5   4325746   PH, RCC1 and FYVE domains-containing protein 1 
 osa-u.5   4338654   PH, RCC1 and FYVE domains-containing protein 1 
 zma-u.5   103653921   Putative regulator of chromosome condensation (RCC1) family protein 
 zma-u.5   103646027   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain 
 zma-u.5   103636281   Putative regulator of chromosome condensation (RCC1) family protein 
 tae-r.2   123145121   PH, RCC1 and FYVE domains-containing protein 1 
 tae-r.2   123046702   PH, RCC1 and FYVE domains-containing protein 1 
 tae-r.2   123160968   PH, RCC1 and FYVE domains-containing protein 1 
 hvu-r.1   123445529   PH, RCC1 and FYVE domains-containing protein 1-like 
 hvu-r.1   123427836   PH, RCC1 and FYVE domains-containing protein 1 
 hvu-r.1   123407055   PH, RCC1 and FYVE domains-containing protein 1-like 
 sbi-r.1   8077365   uncharacterized LOC8077365 
 sbi-r.1   8057696   uncharacterized LOC8057696 
 bdi-r.1   100825305   PH, RCC1 and FYVE domains-containing protein 1 
 bdi-r.1   100834588   PH, RCC1 and FYVE domains-containing protein 1 
 bdi-r.1   100836916   PH, RCC1 and FYVE domains-containing protein 1 
 cre-r.1   CHLRE_16g691050v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G19420 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G19420 (ath-m.9 coexpression data)

CoexMap"832062"


athAT5G19420 | Entrez gene ID : 832062      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 2 3 3 3 3 2 3 2 2 2 2 3 3 3 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010374 [list] [network] stomatal complex development  (68 genes)  IGI  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_001190338.1 [sequence] [blastp]
NP_001330907.1 [sequence] [blastp]
NP_197443.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001190338.1)
nucl 7,  cysk 1,  chlo 1,  mito 1,  chlo_mito 1,  cysk_plas 1  (predict for NP_001330907.1)
nucl 8,  cysk 1  (predict for NP_197443.3)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for NP_001190338.1)
other 6,  mito 6  (predict for NP_001330907.1)
other 6,  mito 6  (predict for NP_197443.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G19420
ath-u.5
for
AT5G19420
ath-r.7
for
AT5G19420
ath-e.2
for
AT5G19420
ath-m.4.bio
for
AT5G19420
ath-m.4.hor
for
AT5G19420
ath-m.4.lig
for
AT5G19420
ath-m.4.str
for
AT5G19420
ath-m.4.tis
for
AT5G19420
ath-u.5
for
AT5G12350
ath-u.5
for
AT1G65920
bra-r.6
for
103856379
bra-r.6
for
103846644
bra-r.6
for
103849089
bna-r.1
for
106434266
bna-r.1
for
106372363
ghi-r.1
for
107895189
ghi-r.1
for
107912868
ghi-r.1
for
107915135
cit-r.1
for
102612328
cit-r.1
for
102623335
cit-r.1
for
102623949
gma-u.5
for
100806439
gma-u.5
for
100797527
gma-u.5
for
100802464
vvi-u.5
for
100253065
vvi-u.5
for
100243300
vvi-u.5
for
100250008
ppo-u.5
for
7496775
ppo-u.5
for
18106548
mtr-u.5
for
112419908
mtr-u.5
for
112417506
mtr-u.5
for
11425815
sly-u.5
for
101256573
sly-u.5
for
101257851
sot-r.1
for
102588539
sot-r.1
for
102590844
nta-r.1
for
107782649
nta-r.1
for
107796116
osa-u.5
for
4325746
osa-u.5
for
4338654
zma-u.5
for
103653921
zma-u.5
for
103646027
zma-u.5
for
103636281
tae-r.2
for
123145121
tae-r.2
for
123046702
tae-r.2
for
123160968
hvu-r.1
for
123445529
hvu-r.1
for
123427836
hvu-r.1
for
123407055
sbi-r.1
for
8077365
sbi-r.1
for
8057696
bdi-r.1
for
100825305
bdi-r.1
for
100834588
bdi-r.1
for
100836916
cre-r.1
for
CHLRE_16g691050v5


Ortholog ID: 695
Species ath ath bra bra bna bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre
Symbol AT5G19420 AT5G12350 LOC103850825 LOC103845756 LOC106372363 LOC106403596 LOC106380801 LOC107920477 LOC107938375 LOC121207585 LOC102612328 LOC102623335 LOC102630015 LOC100806439 G93 LOC100794953 LOC100253065 LOC100243300 LOC100250008 LOC7496775 LOC7476847 LOC112419908 LOC11425815 LOC101256573 LOC101257851 LOC101265608 LOC102588539 LOC102578724 LOC102600493 LOC107806494 LOC107799299 LOC107774471 LOC4325746 LOC4336778 LOC103653921 LOC103646027 LOC103636281 LOC123080719 LOC123054117 LOC123445529 LOC123407055 LOC123401550 LOC8077365 LOC8057696 LOC100834588 LOC100836916 LOC100842512 CHLRE_16g691050v5
Function* Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1-like PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1-like PH, RCC1 and FYVE domains-containing protein 1 PH/RCC1/FYVE zinc finger domain-containing protein G93 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 uncharacterized LOC102588539 uncharacterized LOC102578724 uncharacterized LOC102600493 PH, RCC1 and FYVE domains-containing protein 1-like PH, RCC1 and FYVE domains-containing protein 1-like PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 Putative regulator of chromosome condensation (RCC1) family protein Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain Putative regulator of chromosome condensation (RCC1) family protein PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1-like PH, RCC1 and FYVE domains-containing protein 1-like PH, RCC1 and FYVE domains-containing protein 1-like uncharacterized LOC8077365 uncharacterized LOC8057696 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 4
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 3
gma04075 Plant hormone signal transduction 2
gma00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 3
osa01200 Carbon metabolism 3
osa00260 Glycine, serine and threonine metabolism 2
osa00710 Carbon fixation by Calvin cycle 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 3
sbi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832062 831110 103850825 103845756 106372363 106403596 106380801 107920477 107938375 121207585 102612328 102623335 102630015 100806439 100797223 100794953 100253065 100243300 100250008 7496775 7476847 112419908 11425815 101256573 101257851 101265608 102588539 102578724 102600493 107806494 107799299 107774471 4325746 4336778 103653921 103646027 103636281 123080719 123054117 123445529 123407055 123401550 8077365 8057696 100834588 100836916 100842512 66056808
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