ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT5G36160	Tyrosine transaminase family protein
ath-u.5	AT5G36160	Tyrosine transaminase family protein
ath-r.7	AT5G36160	Tyrosine transaminase family protein
ath-e.2	AT5G36160	Tyrosine transaminase family protein
ath-m.4.bio	AT5G36160	Tyrosine transaminase family protein
ath-m.4.hor	AT5G36160	Tyrosine transaminase family protein
ath-m.4.lig	AT5G36160	Tyrosine transaminase family protein
ath-m.4.str	AT5G36160	Tyrosine transaminase family protein
ath-m.4.tis	AT5G36160	Tyrosine transaminase family protein
ath-u.5	TAT7	Tyrosine transaminase family protein
bra-r.6	103868301	tyrosine aminotransferase
bra-r.6	103852000	probable aminotransferase TAT2
bra-r.6	103842591	tyrosine aminotransferase
bna-r.1	111197947	probable aminotransferase TAT2
bna-r.1	106384874	tyrosine aminotransferase
bna-r.1	125605521	tyrosine aminotransferase
ghi-r.1	107886792	nicotianamine aminotransferase 1
ghi-r.1	107894135	probable aminotransferase TAT2
ghi-r.1	107895254	probable aminotransferase TAT2
cit-r.1	102617885	probable aminotransferase TAT2
cit-r.1	102611153	tyrosine aminotransferase
cit-r.1	102611439	probable aminotransferase TAT2
gma-u.5	732650	tyrosine aminotransferase
gma-u.5	100800830	nicotianamine aminotransferase 1
gma-u.5	100787587	tyrosine aminotransferase-like
vvi-u.5	100241782	probable aminotransferase TAT2
vvi-u.5	100242005	tyrosine aminotransferase
vvi-u.5	100253895	nicotianamine aminotransferase 1
ppo-u.5	18106787	nicotianamine aminotransferase 1
ppo-u.5	7459961	probable aminotransferase TAT2
ppo-u.5	7462312	probable aminotransferase TAT2
mtr-u.5	11406369	probable aminotransferase TAT2
mtr-u.5	25487689	probable aminotransferase TAT2
sly-u.5	101266674	probable aminotransferase TAT2
sly-u.5	101249935	S-alkyl-thiohydroximate lyase-like
sly-u.5	101252470	probable aminotransferase TAT2
sot-r.1	102578536	tyrosine aminotransferase-like
sot-r.1	102594104	probable aminotransferase TAT2
sot-r.1	102590152	probable aminotransferase TAT2
nta-r.1	107776772	putative aminotransferase TAT2
nta-r.1	107788787	putative aminotransferase TAT2
nta-r.1	107789747	nicotianamine aminotransferase 1-like
osa-u.5	9267778	nicotianamine aminotransferase A
osa-u.5	4329101	nicotianamine aminotransferase 1-like
osa-u.5	4329098	tyrosine aminotransferase
zma-u.5	100279999	uncharacterized LOC100279999
zma-u.5	100193424	nicotianamine aminotransferase 1
zma-u.5	100191283	uncharacterized LOC100191283
tae-r.2	123136500	nicotianamine aminotransferase A
tae-r.2	123132659	nicotianamine aminotransferase 1
tae-r.2	123128624	nicotianamine aminotransferase 1
hvu-r.1	123412409	nicotianamine aminotransferase 1-like
hvu-r.1	123445125	nicotianamine aminotransferase A
hvu-r.1	123445116	nicotianamine aminotransferase B
sbi-r.1	110433086	nicotianamine aminotransferase A-like
sbi-r.1	110435496	probable aminotransferase TAT2
sbi-r.1	8081150	nicotianamine aminotransferase A
bdi-r.1	100822209	nicotianamine aminotransferase A
bdi-r.1	100825535	nicotianamine aminotransferase A
bdi-r.1	100831451	nicotianamine aminotransferase A

Top 50 coexpressed genes to AT5G36160 (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT5G36160 (ath-m.9 coexpression data)

CoexMap"833613"

[Cytoscape]

Annotation

functional annotation

KEGG

ath00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (40 genes)

ath00270 [list] [network] Cysteine and methionine metabolism (125 genes)

ath00350 [list] [network] Tyrosine metabolism (41 genes)

ath00360 [list] [network] Phenylalanine metabolism (33 genes)

ath00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (56 genes)

ath00950 [list] [network] Isoquinoline alkaloid biosynthesis (22 genes)

ath00960 [list] [network] Tropane, piperidine and pyridine alkaloid biosynthesis (37 genes)

GO BP

GO:0006559 [list] [network] L-phenylalanine catabolic process	(3 genes)	IGI
GO:0006572 [list] [network] L-tyrosine catabolic process	(4 genes)	IDA IGI
GO:0006520 [list] [network] amino acid metabolic process	(242 genes)	IDA

GO CC

GO:0005829 [list] [network] cytosol	(2593 genes)	HDA IDA
GO:0009536 [list] [network] plastid	(5443 genes)	HDA
GO:0005737 [list] [network] cytoplasm	(14000 genes)	ISM

GO MF

GO:0004838 [list] [network] L-tyrosine-2-oxoglutarate transaminase activity

(4 genes)

IDA

Protein

NP_198465.3 [sequence] [blastp]

Subcellular
localization
wolf

chlo 2, cyto 2, E.R. 2, cyto_E.R. 2, nucl 1, plas 1, nucl_plas 1

(predict for NP_198465.3)

Subcellular
localization
TargetP

other 7

(predict for NP_198465.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT5G36160	ath-u.5 for AT5G36160	ath-r.7 for AT5G36160	ath-e.2 for AT5G36160	ath-m.4.bio for AT5G36160	ath-m.4.hor for AT5G36160	ath-m.4.lig for AT5G36160	ath-m.4.str for AT5G36160	ath-m.4.tis for AT5G36160	ath-u.5 for TAT7	bra-r.6 for 103868301	bra-r.6 for 103852000	bra-r.6 for 103842591	bna-r.1 for 111197947	bna-r.1 for 106384874	bna-r.1 for 125605521	ghi-r.1 for 107886792	ghi-r.1 for 107894135	ghi-r.1 for 107895254	cit-r.1 for 102617885	cit-r.1 for 102611153	cit-r.1 for 102611439	gma-u.5 for 732650	gma-u.5 for 100800830	gma-u.5 for 100787587	vvi-u.5 for 100241782	vvi-u.5 for 100242005	vvi-u.5 for 100253895	ppo-u.5 for 18106787	ppo-u.5 for 7459961	ppo-u.5 for 7462312	mtr-u.5 for 11406369	mtr-u.5 for 25487689	sly-u.5 for 101266674	sly-u.5 for 101249935	sly-u.5 for 101252470	sot-r.1 for 102578536	sot-r.1 for 102594104	sot-r.1 for 102590152	nta-r.1 for 107776772	nta-r.1 for 107788787	nta-r.1 for 107789747	osa-u.5 for 9267778	osa-u.5 for 4329101	osa-u.5 for 4329098	zma-u.5 for 100279999	zma-u.5 for 100193424	zma-u.5 for 100191283	tae-r.2 for 123136500	tae-r.2 for 123132659	tae-r.2 for 123128624	hvu-r.1 for 123412409	hvu-r.1 for 123445125	hvu-r.1 for 123445116	sbi-r.1 for 110433086	sbi-r.1 for 110435496	sbi-r.1 for 8081150	bdi-r.1 for 100822209	bdi-r.1 for 100825535	bdi-r.1 for 100831451

Ortholog

Ortholog ID: 798

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

TAT7

Function^*

Tyrosine transaminase family protein

tyrosine aminotransferase