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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G39840   ATP-dependent RNA helicase 
 ath-u.5   AT5G39840   ATP-dependent RNA helicase 
 ath-r.7   AT5G39840   ATP-dependent RNA helicase 
 ath-e.2   AT5G39840   ATP-dependent RNA helicase 
 ath-m.4.bio   AT5G39840   ATP-dependent RNA helicase 
 ath-m.4.hor   AT5G39840   ATP-dependent RNA helicase 
 ath-m.4.lig   AT5G39840   ATP-dependent RNA helicase 
 ath-m.4.str   AT5G39840   ATP-dependent RNA helicase 
 ath-m.4.tis   AT5G39840   ATP-dependent RNA helicase 
 bra-r.6   103849896   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 bna-r.1   106446024   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial-like 
 bna-r.1   106347824   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 ghi-r.1   121206475   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 ghi-r.1   107892394   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 cit-r.1   102629021   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 gma-u.5   100777064   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 gma-u.5   100777114   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 vvi-u.5   100853943   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 ppo-u.5   7495967   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 mtr-u.5   25495300   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 sly-u.5   101262978   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 sot-r.1   102594581   ATP-dependent RNA helicase SUV3L, mitochondrial 
 nta-r.1   107808650   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial-like 
 nta-r.1   107818603   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 osa-u.5   4336047   ATP-dependent RNA helicase SUV3L, mitochondrial-like 
 zma-u.5   100285160   ATP-dependent RNA helicase SUV3 
 tae-r.2   123189427   ATP-dependent RNA helicase SUV3L, mitochondrial 
 tae-r.2   123053536   ATP-dependent RNA helicase SUV3L, mitochondrial 
 tae-r.2   123045661   ATP-dependent RNA helicase SUV3L, mitochondrial 
 hvu-r.1   123426908   ATP-dependent RNA helicase SUV3L, mitochondrial 
 sbi-r.1   110436085   ATP-dependent RNA helicase SUV3L, mitochondrial 
 bdi-r.1   100821887   ATP-dependent RNA helicase SUV3L, mitochondrial 

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Top 50 coexpressed genes to AT5G39840 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G39840 (ath-m.9 coexpression data)

CoexMap"833980"


athAT5G39840 | Entrez gene ID : 833980      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (42 genes)  IEA  
Protein NP_198800.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  cyto_mito 2  (predict for NP_198800.1)
Subcellular
localization
TargetP
mito 8,  chlo 3  (predict for NP_198800.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G39840
ath-u.5
for
AT5G39840
ath-r.7
for
AT5G39840
ath-e.2
for
AT5G39840
ath-m.4.bio
for
AT5G39840
ath-m.4.hor
for
AT5G39840
ath-m.4.lig
for
AT5G39840
ath-m.4.str
for
AT5G39840
ath-m.4.tis
for
AT5G39840
bra-r.6
for
103849896
bna-r.1
for
106446024
bna-r.1
for
106347824
ghi-r.1
for
121206475
ghi-r.1
for
107892394
cit-r.1
for
102629021
gma-u.5
for
100777064
gma-u.5
for
100777114
vvi-u.5
for
100853943
ppo-u.5
for
7495967
mtr-u.5
for
25495300
sly-u.5
for
101262978
sot-r.1
for
102594581
nta-r.1
for
107808650
nta-r.1
for
107818603
osa-u.5
for
4336047
zma-u.5
for
100285160
tae-r.2
for
123189427
tae-r.2
for
123053536
tae-r.2
for
123045661
hvu-r.1
for
123426908
sbi-r.1
for
110436085
bdi-r.1
for
100821887


Ortholog ID: 9706
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT5G39840 LOC103849896 LOC106446024 LOC106347824 LOC121206475 LOC107892394 LOC102629021 LOC100777064 LOC100777114 LOC100853943 LOC7495967 LOC25495300 LOC101262978 LOC102594581 LOC107808650 LOC107818603 LOC4336047 LOC100285160 LOC123189427 LOC123053536 LOC123045661 LOC123426908 LOC110436085 LOC100821887
Function* ATP-dependent RNA helicase DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial-like DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial-like DExH-box ATP-dependent RNA helicase DExH18, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial-like ATP-dependent RNA helicase SUV3 ATP-dependent RNA helicase SUV3L, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
nta03018 RNA degradation 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
nta03018 RNA degradation 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833980 103849896 106446024 106347824 121206475 107892394 102629021 100777064 100777114 100853943 7495967 25495300 101262978 102594581 107808650 107818603 4336047 100285160 123189427 123053536 123045661 123426908 110436085 100821887
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