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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G62030   diphthamide synthesis DPH2 family protein 
 ath-u.5   AT5G62030   diphthamide synthesis DPH2 family protein 
 ath-r.7   AT5G62030   diphthamide synthesis DPH2 family protein 
 ath-e.2   AT5G62030   diphthamide synthesis DPH2 family protein 
 ath-m.4.bio   AT5G62030   diphthamide synthesis DPH2 family protein 
 ath-m.4.hor   AT5G62030   diphthamide synthesis DPH2 family protein 
 ath-m.4.lig   AT5G62030   diphthamide synthesis DPH2 family protein 
 ath-m.4.str   AT5G62030   diphthamide synthesis DPH2 family protein 
 ath-m.4.tis   AT5G62030   diphthamide synthesis DPH2 family protein 
 bra-r.6   103874640   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 bna-r.1   106402329   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1-like 
 bna-r.1   106427201   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 ghi-r.1   107908609   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 ghi-r.1   121203425   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 gma-u.5   100818417   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 gma-u.5   100797181   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 vvi-u.5   100252989   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 ppo-u.5   7491070   uncharacterized LOC7491070 
 mtr-u.5   11442353   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 sly-u.5   101256980   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 sot-r.1   102581184   diphthamide biosynthesis protein 1 
 nta-r.1   107791245   uncharacterized LOC107791245 
 osa-u.5   4331131   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 zma-u.5   100284663   diphthamide biosynthesis protein 1 
 tae-r.2   123139707   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 tae-r.2   123128959   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 tae-r.2   123146122   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 hvu-r.1   123402136   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 sbi-r.1   8056439   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 bdi-r.1   100829197   2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 
 cre-r.1   CHLRE_09g408500v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G62030 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G62030 (ath-m.9 coexpression data)

CoexMap"836323"


athAT5G62030 | Entrez gene ID : 836323      
Species ath bra bna ghi gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre cit
Paralog 9 1 2 2 2 1 1 1 1 1 1 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1990145 [list] [network] maintenance of translational fidelity  (1 genes)  IMP  
GO:0006450 [list] [network] regulation of translational fidelity  (5 genes)  IMP  
GO:0006979 [list] [network] response to oxidative stress  (384 genes)  IEP  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0090560 [list] [network] 2-(3-amino-3-carboxypropyl)histidine synthase activity  (1 genes)  IMP  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_201009.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  pero 1,  chlo 1,  vacu 1  (predict for NP_201009.1)
Subcellular
localization
TargetP
other 8  (predict for NP_201009.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G62030
ath-u.5
for
AT5G62030
ath-r.7
for
AT5G62030
ath-e.2
for
AT5G62030
ath-m.4.bio
for
AT5G62030
ath-m.4.hor
for
AT5G62030
ath-m.4.lig
for
AT5G62030
ath-m.4.str
for
AT5G62030
ath-m.4.tis
for
AT5G62030
bra-r.6
for
103874640
bna-r.1
for
106402329
bna-r.1
for
106427201
ghi-r.1
for
107908609
ghi-r.1
for
121203425
gma-u.5
for
100818417
gma-u.5
for
100797181
vvi-u.5
for
100252989
ppo-u.5
for
7491070
mtr-u.5
for
11442353
sly-u.5
for
101256980
sot-r.1
for
102581184
nta-r.1
for
107791245
osa-u.5
for
4331131
zma-u.5
for
100284663
tae-r.2
for
123139707
tae-r.2
for
123128959
tae-r.2
for
123146122
hvu-r.1
for
123402136
sbi-r.1
for
8056439
bdi-r.1
for
100829197
cre-r.1
for
CHLRE_09g408500v5


Ortholog ID: 11011
Species ath bra bna bna ghi ghi gma gma vvi ppo mtr sly sot nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT5G62030 LOC103874640 LOC106402329 LOC106427201 LOC107908609 LOC121203425 LOC100818417 LOC100797181 LOC100252989 LOC7491070 LOC11442353 LOC101256980 LOC102581184 LOC107791245 LOC4331131 LOC100284663 LOC123139707 LOC123128959 LOC123146122 LOC123402136 LOC8056439 LOC100829197 CHLRE_09g408500v5
Function* diphthamide synthesis DPH2 family protein 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1-like 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 uncharacterized LOC7491070 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 diphthamide biosynthesis protein 1 uncharacterized LOC107791245 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 diphthamide biosynthesis protein 1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03015 mRNA surveillance pathway 3
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta00260 Glycine, serine and threonine metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836323 103874640 106402329 106427201 107908609 121203425 100818417 100797181 100252989 7491070 11442353 101256980 102581184 107791245 4331131 100284663 123139707 123128959 123146122 123402136 8056439 100829197 5722242
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