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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   OSB4   organellar single-stranded DNA binding protein 4 
 ath-u.5   OSB4   organellar single-stranded DNA binding protein 4 
 ath-r.7   OSB4   organellar single-stranded DNA binding protein 4 
 ath-e.2   OSB4   organellar single-stranded DNA binding protein 4 
 ath-m.4.bio   OSB4   organellar single-stranded DNA binding protein 4 
 ath-m.4.hor   OSB4   organellar single-stranded DNA binding protein 4 
 ath-m.4.lig   OSB4   organellar single-stranded DNA binding protein 4 
 ath-m.4.str   OSB4   organellar single-stranded DNA binding protein 4 
 ath-m.4.tis   OSB4   organellar single-stranded DNA binding protein 4 
 ath-u.5   PTAC9   plastid transcriptionally active 9 
 ath-u.5   OSB3   organellar single-stranded DNA binding protein 3 
 bra-r.6   103840276   protein OSB4, chloroplastic 
 bra-r.6   103827828   protein OSB3, chloroplastic/mitochondrial 
 bna-r.1   106440403   protein OSB2, chloroplastic-like 
 bna-r.1   125600667   protein OSB2, chloroplastic-like 
 bna-r.1   106421197   protein OSB2, chloroplastic 
 ghi-r.1   107933321   protein OSB3, chloroplastic/mitochondrial 
 ghi-r.1   107898675   protein OSB3, chloroplastic/mitochondrial 
 cit-r.1   102610125   protein OSB2, chloroplastic 
 gma-u.5   100788700   protein OSB3, chloroplastic/mitochondrial-like 
 vvi-u.5   100852454   protein OSB2, chloroplastic 
 ppo-u.5   18095520   protein OSB2, chloroplastic 
 mtr-u.5   11436977   protein OSB3, chloroplastic/mitochondrial 
 sly-u.5   101253926   protein OSB2, chloroplastic 
 sot-r.1   102586350   protein OSB2, chloroplastic-like 
 nta-r.1   107764681   protein OSB2, chloroplastic-like 
 nta-r.1   107762478   protein OSB2, chloroplastic-like 
 osa-u.5   4325759   protein OSB2, chloroplastic 
 zma-u.5   100278261   Protein OSB2 chloroplastic 
 tae-r.2   123063459   protein OSB2, chloroplastic 
 tae-r.2   123072469   protein OSB2, chloroplastic 
 tae-r.2   123080698   protein OSB2, chloroplastic 
 hvu-r.1   123445488   protein OSB2, chloroplastic-like 
 sbi-r.1   8062318   protein OSB2, chloroplastic 
 bdi-r.1   100831823   protein OSB2, chloroplastic 
 cre-r.1   CHLRE_12g483720v5   uncharacterized protein 

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Top 50 coexpressed genes to OSB4 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to OSB4 (ath-m.9 coexpression data)

CoexMap"839987"


athOSB4 | Entrez gene ID : 839987      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 2 3 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_564370.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1  (predict for NP_564370.1)
Subcellular
localization
TargetP
chlo 7,  mito 5  (predict for NP_564370.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
OSB4
ath-u.5
for
OSB4
ath-r.7
for
OSB4
ath-e.2
for
OSB4
ath-m.4.bio
for
OSB4
ath-m.4.hor
for
OSB4
ath-m.4.lig
for
OSB4
ath-m.4.str
for
OSB4
ath-m.4.tis
for
OSB4
ath-u.5
for
PTAC9
ath-u.5
for
OSB3
bra-r.6
for
103840276
bra-r.6
for
103827828
bna-r.1
for
106440403
bna-r.1
for
125600667
bna-r.1
for
106421197
ghi-r.1
for
107933321
ghi-r.1
for
107898675
cit-r.1
for
102610125
gma-u.5
for
100788700
vvi-u.5
for
100852454
ppo-u.5
for
18095520
mtr-u.5
for
11436977
sly-u.5
for
101253926
sot-r.1
for
102586350
nta-r.1
for
107764681
nta-r.1
for
107762478
osa-u.5
for
4325759
zma-u.5
for
100278261
tae-r.2
for
123063459
tae-r.2
for
123072469
tae-r.2
for
123080698
hvu-r.1
for
123445488
sbi-r.1
for
8062318
bdi-r.1
for
100831823
cre-r.1
for
CHLRE_12g483720v5


Ortholog ID: 6610
Species ath ath ath bra bra bna bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol OSB4 PTAC9 OSB3 LOC103840276 LOC103827828 LOC125600667 LOC106391164 LOC106386359 LOC107933321 LOC107898675 LOC102610125 LOC100788700 LOC100852454 LOC18095520 LOC11436977 LOC101253926 LOC102586350 LOC107764681 LOC107762478 LOC4325759 LOC100278261 LOC123063459 LOC123072469 LOC123080698 LOC123445488 LOC8062318 LOC100831823 CHLRE_12g483720v5
Function* organellar single-stranded DNA binding protein 4 plastid transcriptionally active 9 organellar single-stranded DNA binding protein 3 protein OSB4, chloroplastic protein OSB3, chloroplastic/mitochondrial protein OSB2, chloroplastic-like protein OSB3, chloroplastic/mitochondrial protein OSB3, chloroplastic/mitochondrial protein OSB3, chloroplastic/mitochondrial protein OSB3, chloroplastic/mitochondrial protein OSB2, chloroplastic protein OSB3, chloroplastic/mitochondrial-like protein OSB2, chloroplastic protein OSB2, chloroplastic protein OSB3, chloroplastic/mitochondrial protein OSB2, chloroplastic protein OSB2, chloroplastic-like protein OSB2, chloroplastic-like protein OSB2, chloroplastic-like protein OSB2, chloroplastic Protein OSB2 chloroplastic protein OSB2, chloroplastic protein OSB2, chloroplastic protein OSB2, chloroplastic protein OSB2, chloroplastic-like protein OSB2, chloroplastic protein OSB2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03440 Homologous recombination 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi00240 Pyrimidine metabolism 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839987 827746 834508 103840276 103827828 125600667 106391164 106386359 107933321 107898675 102610125 100788700 100852454 18095520 11436977 101253926 102586350 107764681 107762478 4325759 100278261 123063459 123072469 123080698 123445488 8062318 100831823 5728705
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