Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G48160   signal recognition particle 19 kDa protein, putative / SRP19 
 ath-u.5   AT1G48160   signal recognition particle 19 kDa protein, putative / SRP19 
 ath-r.7   AT1G48160   signal recognition particle 19 kDa protein, putative / SRP19 
 ath-e.2   AT1G48160   signal recognition particle 19 kDa protein, putative / SRP19 
 ath-m.4.bio   AT1G48160   signal recognition particle 19 kDa protein, putative / SRP19 
 ath-m.4.hor   AT1G48160   signal recognition particle 19 kDa protein, putative / SRP19 
 ath-m.4.lig   AT1G48160   signal recognition particle 19 kDa protein, putative / SRP19 
 ath-m.4.str   AT1G48160   signal recognition particle 19 kDa protein, putative / SRP19 
 ath-m.4.tis   AT1G48160   signal recognition particle 19 kDa protein, putative / SRP19 
 bra-r.6   103833043   signal recognition particle 19 kDa protein 
 bra-r.6   103868692   signal recognition particle 19 kDa protein 
 bna-r.1   106425169   signal recognition particle 19 kDa protein 
 bna-r.1   125575105   signal recognition particle 19 kDa protein-like 
 bna-r.1   106451803   signal recognition particle 19 kDa protein 
 ghi-r.1   107960275   signal recognition particle 19 kDa protein 
 ghi-r.1   121230849   signal recognition particle 19 kDa protein 
 cit-r.1   102620397   signal recognition particle 19 kDa protein 
 gma-u.5   100801614   signal recognition particle 19 kDa protein-like 
 gma-u.5   100500027   uncharacterized LOC100500027 
 vvi-u.5   100264739   signal recognition particle 19 kDa protein 
 vvi-u.5   100854647   signal recognition particle 19 kDa protein 
 ppo-u.5   7462510   signal recognition particle 19 kDa protein 
 ppo-u.5   7493484   signal recognition particle 19 kDa protein 
 mtr-u.5   25499231   signal recognition particle 19 kDa protein 
 sly-u.5   101248030   signal recognition particle 19 kDa protein 
 sot-r.1   102601905   signal recognition particle 19 kDa protein 
 sot-r.1   102580861   signal recognition particle 19 kDa protein-like 
 nta-r.1   107814099   signal recognition particle 19 kDa protein-like 
 nta-r.1   107792354   signal recognition particle 19 kDa protein 
 osa-u.5   4340957   signal recognition particle 19 kDa protein-like 
 zma-u.5   103645776   signal recognition particle 19 kDa protein 
 zma-u.5   100282410   signal recognition particle 19 kDa protein 
 tae-r.2   123147737   signal recognition particle 19 kDa protein 
 tae-r.2   123160317   signal recognition particle 19 kDa protein 
 tae-r.2   123166765   signal recognition particle 19 kDa protein 
 hvu-r.1   123410823   signal recognition particle 19 kDa protein 
 sbi-r.1   8073395   signal recognition particle 19 kDa protein 
 bdi-r.1   100845655   signal recognition particle 19 kDa protein 
 bdi-r.1   100822917   signal recognition particle 19 kDa protein 
 bdi-r.1   100822604   signal recognition particle 19 kDa protein 
 cre-r.1   CHLRE_02g095070v5   uncharacterized protein 

close


Top 50 coexpressed genes to AT1G48160 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT1G48160 (ath-m.9 coexpression data)

CoexMap"841235"


athAT1G48160 | Entrez gene ID : 841235      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 2 2 1 1 2 2 1 2 3 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03060 [list] [network] Protein export (62 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_001323146.1 [sequence] [blastp]
NP_175250.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001323146.1)
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_175250.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001323146.1)
other 7  (predict for NP_175250.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G48160
ath-u.5
for
AT1G48160
ath-r.7
for
AT1G48160
ath-e.2
for
AT1G48160
ath-m.4.bio
for
AT1G48160
ath-m.4.hor
for
AT1G48160
ath-m.4.lig
for
AT1G48160
ath-m.4.str
for
AT1G48160
ath-m.4.tis
for
AT1G48160
bra-r.6
for
103833043
bra-r.6
for
103868692
bna-r.1
for
106425169
bna-r.1
for
125575105
bna-r.1
for
106451803
ghi-r.1
for
107960275
ghi-r.1
for
121230849
cit-r.1
for
102620397
gma-u.5
for
100801614
gma-u.5
for
100500027
vvi-u.5
for
100264739
vvi-u.5
for
100854647
ppo-u.5
for
7462510
ppo-u.5
for
7493484
mtr-u.5
for
25499231
sly-u.5
for
101248030
sot-r.1
for
102601905
sot-r.1
for
102580861
nta-r.1
for
107814099
nta-r.1
for
107792354
osa-u.5
for
4340957
zma-u.5
for
103645776
zma-u.5
for
100282410
tae-r.2
for
123147737
tae-r.2
for
123160317
tae-r.2
for
123166765
hvu-r.1
for
123410823
sbi-r.1
for
8073395
bdi-r.1
for
100845655
bdi-r.1
for
100822917
bdi-r.1
for
100822604
cre-r.1
for
CHLRE_02g095070v5


Ortholog ID: 6152
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi vvi ppo ppo mtr sly sot sot nta nta osa zma zma tae tae tae hvu sbi bdi bdi bdi cre
Symbol AT1G48160 LOC103833043 LOC103868692 LOC106425169 LOC106451803 LOC125577000 LOC107960275 LOC121230849 LOC102620397 LOC100801614 LOC100500027 LOC100264739 LOC100854647 LOC7462510 LOC7493484 LOC25499231 LOC101248030 LOC102601905 LOC102580861 LOC107814099 LOC107792354 LOC4340957 LOC103645776 LOC100282410 LOC123147737 LOC123160317 LOC123166765 LOC123410823 LOC8073395 LOC100845655 LOC100822604 LOC100838659 CHLRE_02g095070v5
Function* signal recognition particle 19 kDa protein, putative / SRP19 signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein-like signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein-like uncharacterized LOC100500027 signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein-like signal recognition particle 19 kDa protein-like signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein-like signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein uncharacterized LOC100838659 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 3
ath04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 3
bna00510 N-Glycan biosynthesis 2
bna00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 3
bna00510 N-Glycan biosynthesis 2
bna00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 18
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04144 Endocytosis 2
gma03420 Nucleotide excision repair 2
gma03060 Protein export 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03050 Proteasome 3
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 5
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 6
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 4
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma03060 Protein export 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 7
tae03060 Protein export 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae03060 Protein export 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 3
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 7
bdi03060 Protein export 5
bdi03040 Spliceosome 2
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841235 103833043 103868692 106425169 106451803 125577000 107960275 121230849 102620397 100801614 100500027 100264739 100854647 7462510 7493484 25499231 101248030 102601905 102580861 107814099 107792354 4340957 103645776 100282410 123147737 123160317 123166765 123410823 8073395 100845655 100822604 100838659 5727715
The preparation time of this page was 0.1 [sec].