ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-m.9	AHG2	Polynucleotidyl transferase, ribonuclease H-like superfamily protein
ath-u.5	AHG2	Polynucleotidyl transferase, ribonuclease H-like superfamily protein
ath-r.7	AHG2	Polynucleotidyl transferase, ribonuclease H-like superfamily protein
ath-e.2	AHG2	Polynucleotidyl transferase, ribonuclease H-like superfamily protein
ath-m.4.bio	AHG2	Polynucleotidyl transferase, ribonuclease H-like superfamily protein
ath-m.4.hor	AHG2	Polynucleotidyl transferase, ribonuclease H-like superfamily protein
ath-m.4.lig	AHG2	Polynucleotidyl transferase, ribonuclease H-like superfamily protein
ath-m.4.str	AHG2	Polynucleotidyl transferase, ribonuclease H-like superfamily protein
ath-m.4.tis	AHG2	Polynucleotidyl transferase, ribonuclease H-like superfamily protein
bra-r.6	103871015	poly(A)-specific ribonuclease PARN
bna-r.1	106415384	poly(A)-specific ribonuclease PARN
bna-r.1	125610054	poly(A)-specific ribonuclease PARN-like
ghi-r.1	107952988	poly(A)-specific ribonuclease PARN
ghi-r.1	107922431	poly(A)-specific ribonuclease PARN
cit-r.1	102630341	poly(A)-specific ribonuclease PARN
gma-u.5	100784997	poly(A)-specific ribonuclease PARN
gma-u.5	100808217	poly(A)-specific ribonuclease PARN
vvi-u.5	100258377	poly(A)-specific ribonuclease PARN
ppo-u.5	7497342	poly(A)-specific ribonuclease PARN-like
ppo-u.5	7487549	poly(A)-specific ribonuclease PARN
mtr-u.5	25490728	poly(A)-specific ribonuclease PARN
sly-u.5	101250035	poly(A)-specific ribonuclease PARN
sot-r.1	107060326	poly(A)-specific ribonuclease PARN-like
sot-r.1	102581626	poly(A)-specific ribonuclease PARN
nta-r.1	107767706	poly(A)-specific ribonuclease PARN
nta-r.1	107804188	poly(A)-specific ribonuclease PARN-like
osa-u.5	9268289	poly(A)-specific ribonuclease PARN
zma-u.5	100383372	Poly(A)-specific ribonuclease PARN
tae-r.2	123189466	poly(A)-specific ribonuclease PARN
tae-r.2	123053584	poly(A)-specific ribonuclease PARN
tae-r.2	123045712	poly(A)-specific ribonuclease PARN
hvu-r.1	123426963	poly(A)-specific ribonuclease PARN
sbi-r.1	8073560	poly(A)-specific ribonuclease PARN
bdi-r.1	100828356	poly(A)-specific ribonuclease PARN
cre-r.1	CHLRE_02g090276v5	uncharacterized protein
cre-r.1	CHLRE_02g095071v5	uncharacterized protein

Annotation

functional annotation

KEGG

ath03018 [list] [network] RNA degradation (114 genes)

GO BP

GO:0009751 [list] [network] response to salicylic acid	(179 genes)	IMP
GO:0009651 [list] [network] response to salt stress	(473 genes)	IMP
GO:0009737 [list] [network] response to abscisic acid	(550 genes)	IMP
GO:0006970 [list] [network] response to osmotic stress	(578 genes)	IMP

GO CC

GO:0005739 [list] [network] mitochondrion	(4244 genes)	IDA
GO:0005634 [list] [network] nucleus	(10367 genes)	ISM

GO MF

GO:0043169 [list] [network] cation binding

(956 genes)

ISS

Protein

NP_001319244.1 [sequence] [blastp]
NP_001322686.1 [sequence] [blastp]
NP_001322687.1 [sequence] [blastp]
NP_175983.5 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 4, plas 1	(predict for NP_001319244.1)
nucl 5, cyto 2, chlo 1, plas 1, cysk 1, E.R._vacu 1, cysk_plas 1	(predict for NP_001322686.1)
nucl 4, cyto 4, plas 1	(predict for NP_001322687.1)
chlo 6, chlo_mito 4, mito 2, cyto_mito 1	(predict for NP_175983.5)

Subcellular
localization
TargetP

other 9, mito 3	(predict for NP_001319244.1)
other 9	(predict for NP_001322686.1)
other 9, mito 3	(predict for NP_001322687.1)
mito 6	(predict for NP_175983.5)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AHG2	ath-u.5 for AHG2	ath-r.7 for AHG2	ath-e.2 for AHG2	ath-m.4.bio for AHG2	ath-m.4.hor for AHG2	ath-m.4.lig for AHG2	ath-m.4.str for AHG2	ath-m.4.tis for AHG2	bra-r.6 for 103871015	bna-r.1 for 106415384	bna-r.1 for 125610054	ghi-r.1 for 107952988	ghi-r.1 for 107922431	cit-r.1 for 102630341	gma-u.5 for 100784997	gma-u.5 for 100808217	vvi-u.5 for 100258377	ppo-u.5 for 7497342	ppo-u.5 for 7487549	mtr-u.5 for 25490728	sly-u.5 for 101250035	sot-r.1 for 107060326	sot-r.1 for 102581626	nta-r.1 for 107767706	nta-r.1 for 107804188	osa-u.5 for 9268289	zma-u.5 for 100383372	tae-r.2 for 123189466	tae-r.2 for 123053584	tae-r.2 for 123045712	hvu-r.1 for 123426963	sbi-r.1 for 8073560	bdi-r.1 for 100828356	cre-r.1 for CHLRE_02g090276v5	cre-r.1 for CHLRE_02g095071v5

Ortholog

Ortholog ID: 8745

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

AHG2

Function^*

Polynucleotidyl transferase, ribonuclease H-like superfamily protein