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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   FAS1   chromatin assembly factor-1 (FASCIATA1) (FAS1) 
 ath-u.5   FAS1   chromatin assembly factor-1 (FASCIATA1) (FAS1) 
 ath-r.7   FAS1   chromatin assembly factor-1 (FASCIATA1) (FAS1) 
 ath-e.2   FAS1   chromatin assembly factor-1 (FASCIATA1) (FAS1) 
 ath-m.4.bio   FAS1   chromatin assembly factor-1 (FASCIATA1) (FAS1) 
 ath-m.4.hor   FAS1   chromatin assembly factor-1 (FASCIATA1) (FAS1) 
 ath-m.4.lig   FAS1   chromatin assembly factor-1 (FASCIATA1) (FAS1) 
 ath-m.4.str   FAS1   chromatin assembly factor-1 (FASCIATA1) (FAS1) 
 ath-m.4.tis   FAS1   chromatin assembly factor-1 (FASCIATA1) (FAS1) 
 bra-r.6   103831056   chromatin assembly factor 1 subunit FAS1 
 bna-r.1   106426288   chromatin assembly factor 1 subunit FAS1 
 bna-r.1   106407368   chromatin assembly factor 1 subunit FAS1 
 ghi-r.1   107951952   chromatin assembly factor 1 subunit FAS1 
 ghi-r.1   107940734   chromatin assembly factor 1 subunit FAS1 
 ghi-r.1   107939692   chromatin assembly factor 1 subunit FAS1 
 cit-r.1   102609168   chromatin assembly factor 1 subunit FAS1 
 gma-u.5   100811035   chromatin assembly factor 1 subunit FAS1 
 gma-u.5   100802884   chromatin assembly factor 1 subunit FAS1 
 vvi-u.5   100261350   chromatin assembly factor 1 subunit FAS1 
 ppo-u.5   7472465   chromatin assembly factor 1 subunit FAS1 
 mtr-u.5   11426053   chromatin assembly factor 1 subunit FAS1 
 sly-u.5   101250265   chromatin assembly factor 1 subunit FAS1 
 sot-r.1   102605655   chromatin assembly factor 1 subunit FAS1 
 nta-r.1   107762321   chromatin assembly factor 1 subunit FAS1-like 
 nta-r.1   107768080   chromatin assembly factor 1 subunit FAS1 
 osa-u.5   4324973   chromatin assembly factor 1 subunit FSM-like 
 osa-u.5   107276899   chromatin assembly factor 1 subunit FSM-like 
 zma-u.5   103650893   chromatin assembly factor 1 subunit FSM 
 zma-u.5   103632188   chromatin assembly factor 1 subunit FSM 
 zma-u.5   100101530   chromatin assembly factor 1 subunit FSM 
 tae-r.2   123104643   chromatin assembly factor 1 subunit FSM 
 tae-r.2   123112906   chromatin assembly factor 1 subunit FSM 
 tae-r.2   123122426   chromatin assembly factor 1 subunit FSM 
 hvu-r.1   123400210   chromatin assembly factor 1 subunit FSM 
 hvu-r.1   123407392   uncharacterized LOC123407392 
 hvu-r.1   123425932   chromatin assembly factor 1 subunit FSM-like 
 sbi-r.1   8057271   chromatin assembly factor 1 subunit FSM 
 sbi-r.1   8078671   chromatin assembly factor 1 subunit FSM 
 bdi-r.1   100846224   chromatin assembly factor 1 subunit FSM 
 cre-r.1   CHLRE_12g550152v5   uncharacterized protein 

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Top 50 coexpressed genes to FAS1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FAS1 (ath-m.9 coexpression data)

CoexMap"842858"


athFAS1 | Entrez gene ID : 842858      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 1 2 1 1 1 1 1 2 2 3 3 3 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006334 [list] [network] nucleosome assembly  (13 genes)  IDA  
GO:0009934 [list] [network] regulation of meristem structural organization  (22 genes)  IMP  
GO:0045787 [list] [network] positive regulation of cell cycle  (29 genes)  IGI  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (43 genes)  IMP  
GO:0009825 [list] [network] multidimensional cell growth  (43 genes)  IMP  
GO:0031507 [list] [network] heterochromatin formation  (74 genes)  IMP  
GO:0010026 [list] [network] trichome differentiation  (86 genes)  IMP  
GO:0006310 [list] [network] DNA recombination  (113 genes)  IEP IMP  
GO:0051301 [list] [network] cell division  (192 genes)  IMP  
GO:0006325 [list] [network] chromatin organization  (231 genes)  IDA  
GO:0048366 [list] [network] leaf development  (371 genes)  IMP  
GO:0009555 [list] [network] pollen development  (385 genes)  IGI  
GO CC
GO:0033186 [list] [network] CAF-1 complex  (2 genes)  IPI  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0042393 [list] [network] histone binding  (50 genes)  ISS  
Protein NP_001185320.1 [sequence] [blastp]
NP_176725.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001185320.1)
nucl 10  (predict for NP_176725.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001185320.1)
other 8  (predict for NP_176725.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
FAS1
ath-u.5
for
FAS1
ath-r.7
for
FAS1
ath-e.2
for
FAS1
ath-m.4.bio
for
FAS1
ath-m.4.hor
for
FAS1
ath-m.4.lig
for
FAS1
ath-m.4.str
for
FAS1
ath-m.4.tis
for
FAS1
bra-r.6
for
103831056
bna-r.1
for
106426288
bna-r.1
for
106407368
ghi-r.1
for
107951952
ghi-r.1
for
107940734
ghi-r.1
for
107939692
cit-r.1
for
102609168
gma-u.5
for
100811035
gma-u.5
for
100802884
vvi-u.5
for
100261350
ppo-u.5
for
7472465
mtr-u.5
for
11426053
sly-u.5
for
101250265
sot-r.1
for
102605655
nta-r.1
for
107762321
nta-r.1
for
107768080
osa-u.5
for
4324973
osa-u.5
for
107276899
zma-u.5
for
103650893
zma-u.5
for
103632188
zma-u.5
for
100101530
tae-r.2
for
123104643
tae-r.2
for
123112906
tae-r.2
for
123122426
hvu-r.1
for
123400210
hvu-r.1
for
123407392
hvu-r.1
for
123425932
sbi-r.1
for
8057271
sbi-r.1
for
8078671
bdi-r.1
for
100846224
cre-r.1
for
CHLRE_12g550152v5


Ortholog ID: 6433
Species ath bra bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi cre
Symbol FAS1 LOC103831056 LOC106426288 LOC106407368 LOC107951952 LOC107940734 LOC107939692 LOC102609168 LOC100811035 LOC100802884 LOC100261350 LOC7472465 LOC11426053 LOC101250265 LOC102605655 LOC107762321 LOC107768080 LOC4324973 LOC107276899 LOC103650893 LOC103632188 LOC100101530 LOC123104643 LOC123112906 LOC123122426 LOC123400210 LOC123407392 LOC123425932 LOC8057271 LOC8078671 LOC100846224 CHLRE_12g550152v5
Function* chromatin assembly factor-1 (FASCIATA1) (FAS1) chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1-like chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FSM-like chromatin assembly factor 1 subunit FSM-like chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FSM uncharacterized LOC123407392 chromatin assembly factor 1 subunit FSM-like chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FSM uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath03460 Fanconi anemia pathway 4
ath03030 DNA replication 4
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 5
bra03430 Mismatch repair 5
bra03440 Homologous recombination 5
bra03420 Nucleotide excision repair 4
bra03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 10
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 12
bna03420 Nucleotide excision repair 5
bna03430 Mismatch repair 5
bna03440 Homologous recombination 5
bna03460 Fanconi anemia pathway 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi03460 Fanconi anemia pathway 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 3
cit00230 Purine metabolism 2
cit00240 Pyrimidine metabolism 2
cit00480 Glutathione metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 8
gma03440 Homologous recombination 3
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 8
gma03082 ATP-dependent chromatin remodeling 3
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 11
ppo03420 Nucleotide excision repair 3
ppo03440 Homologous recombination 2
ppo03460 Fanconi anemia pathway 2
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 3
sly00230 Purine metabolism 2
sly00240 Pyrimidine metabolism 2
sly00480 Glutathione metabolism 2
sly01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 6
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 3
osa03440 Homologous recombination 3
osa03420 Nucleotide excision repair 2
osa03430 Mismatch repair 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 3
zma03030 DNA replication 2
zma03410 Base excision repair 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 8
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 7
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 2
bdi03410 Base excision repair 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842858 103831056 106426288 106407368 107951952 107940734 107939692 102609168 100811035 100802884 100261350 7472465 11426053 101250265 102605655 107762321 107768080 4324973 107276899 103650893 103632188 100101530 123104643 123112906 123122426 123400210 123407392 123425932 8057271 8078671 100846224 66055792
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