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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AGL12   AGAMOUS-like 12 
 ath-u.5   AGL12   AGAMOUS-like 12 
 ath-r.7   AGL12   AGAMOUS-like 12 
 ath-e.2   AGL12   AGAMOUS-like 12 
 ath-m.4.bio   AGL12   AGAMOUS-like 12 
 ath-m.4.hor   AGL12   AGAMOUS-like 12 
 ath-m.4.lig   AGL12   AGAMOUS-like 12 
 ath-m.4.str   AGL12   AGAMOUS-like 12 
 ath-m.4.tis   AGL12   AGAMOUS-like 12 
 bra-r.6   103830841   agamous-like MADS-box protein AGL12 
 bra-r.6   103831676   agamous-like MADS-box protein AGL12 
 bra-r.6   103852713   agamous-like MADS-box protein AGL12 
 bna-r.1   106414354   agamous-like MADS-box protein AGL12 
 bna-r.1   106397842   agamous-like MADS-box protein AGL12 
 bna-r.1   106381088   agamous-like MADS-box protein AGL12 
 ghi-r.1   107952051   agamous-like MADS-box protein AGL12 
 ghi-r.1   107919016   agamous-like MADS-box protein AGL12 
 gma-u.5   100815314   agamous-like MADS-box protein AGL12 
 gma-u.5   100783345   agamous-like MADS-box protein AGL12-like protein 
 mtr-u.5   25491856   agamous-like MADS-box protein AGL12 
 sly-u.5   544256   TAGL12 transcription factor 
 sot-r.1   102599417   agamous-like MADS-box protein AGL12 
 nta-r.1   107772110   agamous-like MADS-box protein AGL12 
 nta-r.1   107832036   agamous-like MADS-box protein AGL12 
 osa-u.5   4344493   MADS-box transcription factor 26-like 
 zma-u.5   103628959   MADS-box transcription factor 26 
 zma-u.5   100282492   MADS-box transcription factor 26 
 tae-r.2   123053398   MADS-box transcription factor 26 
 tae-r.2   123045555   MADS-box transcription factor 26-like 
 hvu-r.1   123426807   MADS-box transcription factor 26-like 
 hvu-r.1   123409312   MADS-box transcription factor 26 
 sbi-r.1   8075852   MADS-box transcription factor 26 
 sbi-r.1   8066077   MADS-box transcription factor 26 
 bdi-r.1   100835552   MADS-box transcription factor 26-like 
 bdi-r.1   100829055   MADS-box transcription factor 26-like 

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Top 50 coexpressed genes to AGL12 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AGL12 (ath-m.9 coexpression data)

CoexMap"843497"


athAGL12 | Entrez gene ID : 843497      
Species ath bra bna ghi gma mtr sly sot nta osa zma tae hvu sbi bdi ppo cre vvi cit
Paralog 9 3 3 2 2 1 1 1 2 1 2 2 2 2 2 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (186 genes)  IMP  
GO:0048364 [list] [network] root development  (600 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_565022.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 2,  chlo 1,  plas 1,  cyto_mito 1,  golg_plas 1  (predict for NP_565022.1)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for NP_565022.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AGL12
ath-u.5
for
AGL12
ath-r.7
for
AGL12
ath-e.2
for
AGL12
ath-m.4.bio
for
AGL12
ath-m.4.hor
for
AGL12
ath-m.4.lig
for
AGL12
ath-m.4.str
for
AGL12
ath-m.4.tis
for
AGL12
bra-r.6
for
103830841
bra-r.6
for
103831676
bra-r.6
for
103852713
bna-r.1
for
106414354
bna-r.1
for
106397842
bna-r.1
for
106381088
ghi-r.1
for
107952051
ghi-r.1
for
107919016
gma-u.5
for
100815314
gma-u.5
for
100783345
mtr-u.5
for
25491856
sly-u.5
for
544256
sot-r.1
for
102599417
nta-r.1
for
107772110
nta-r.1
for
107832036
osa-u.5
for
4344493
zma-u.5
for
103628959
zma-u.5
for
100282492
tae-r.2
for
123053398
tae-r.2
for
123045555
hvu-r.1
for
123426807
hvu-r.1
for
123409312
sbi-r.1
for
8075852
sbi-r.1
for
8066077
bdi-r.1
for
100835552
bdi-r.1
for
100829055


Ortholog ID: 4158
Species ath bra bra bra bna bna bna ghi ghi gma gma mtr sly sot nta nta osa zma zma tae tae hvu hvu sbi sbi bdi
Symbol AGL12 LOC103830841 LOC103831676 LOC103852713 LOC106414354 LOC106381088 LOC106345490 LOC107952051 LOC107919016 LOC100815314 LOC100783345 LOC25491856 LOC544256 LOC102599417 LOC107772110 LOC107832036 LOC4344493 LOC103628959 LOC100282492 LOC123189307 LOC100136962 LOC123426807 LOC123409312 LOC8075852 LOC8066077 LOC100829055
Function* AGAMOUS-like 12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12-like protein agamous-like MADS-box protein AGL12 TAGL12 transcription factor agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 MADS-box transcription factor 26-like MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26-like MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00750 Vitamin B6 metabolism 3
gma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 6
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
tae01230 Biosynthesis of amino acids 2
tae00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
bdi00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843497 103830841 103831676 103852713 106414354 106381088 106345490 107952051 107919016 100815314 100783345 25491856 544256 102599417 107772110 107832036 4344493 103628959 100282492 123189307 100136962 123426807 123409312 8075852 8066077 100829055
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