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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107919016   agamous-like MADS-box protein AGL12 
 ath-u.5   AGL12   AGAMOUS-like 12 
 gma-u.5   100815314   agamous-like MADS-box protein AGL12 
 gma-u.5   100783345   agamous-like MADS-box protein AGL12-like protein 
 mtr-u.5   25491856   agamous-like MADS-box protein AGL12 
 sly-u.5   544256   TAGL12 transcription factor 
 osa-u.5   4344493   MADS-box transcription factor 26-like 
 zma-u.5   103628959   MADS-box transcription factor 26 
 zma-u.5   100282492   MADS-box transcription factor 26 

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Top 50 coexpressed genes to 107919016 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107919016 (ghi-r.1 coexpression data)

CoexMap"107919016"


ghiLOC107919016 | Entrez gene ID : 107919016    
Species ghi ath gma mtr sly osa zma bdi hvu bra vvi cit bna ppo sbi sot nta cre tae
Paralog 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (349 genes)  IEA  
GO CC
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (605 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (729 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
Protein XP_016704045.1 [sequence] [blastp]
XP_016704046.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  nucl 2,  cyto 2,  mito 2,  cyto_nucl 2,  chlo_mito 2  (predict for XP_016704045.1)
chlo 3,  cyto 2,  mito 2,  nucl 1,  plas 1,  cyto_mito 1,  golg_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_016704046.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for XP_016704045.1)
other 6,  mito 5  (predict for XP_016704046.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107919016
ath-u.5
for
AGL12
gma-u.5
for
100815314
gma-u.5
for
100783345
mtr-u.5
for
25491856
sly-u.5
for
544256
osa-u.5
for
4344493
zma-u.5
for
103628959
zma-u.5
for
100282492


Ortholog ID: 4158
Species ghi ghi ath bra bra bna bna gma gma mtr sly sot nta nta zma zma tae tae hvu hvu sbi sbi bdi
Symbol LOC107919016 LOC107952051 AGL12 LOC103830841 LOC103831676 LOC106345490 LOC106414354 LOC100815314 LOC100783345 LOC25491856 LOC544256 LOC102599417 LOC107772110 LOC107832036 LOC100282492 LOC103628959 LOC100136962 LOC123189307 LOC123409312 LOC123426807 LOC8066077 LOC8075852 LOC100829055
Function* agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 AGAMOUS-like 12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12-like protein agamous-like MADS-box protein AGL12 TAGL12 transcription factor agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26-like MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00750 Vitamin B6 metabolism 3
gma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 6
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
tae01230 Biosynthesis of amino acids 2
tae00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
bdi00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107919016 107952051 843497 103830841 103831676 106345490 106414354 100815314 100783345 25491856 544256 102599417 107772110 107832036 100282492 103628959 100136962 123189307 123409312 123426807 8066077 8075852 100829055
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