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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103830841   agamous-like MADS-box protein AGL12 
 bra-r.6   103852713   agamous-like MADS-box protein AGL12 
 bra-r.6   103831676   agamous-like MADS-box protein AGL12 
 bna-r.1   106414354   agamous-like MADS-box protein AGL12 
 bna-r.1   106397842   agamous-like MADS-box protein AGL12 
 bna-r.1   106381088   agamous-like MADS-box protein AGL12 
 ath-u.5   AGL12   AGAMOUS-like 12 
 ghi-r.1   107952051   agamous-like MADS-box protein AGL12 
 ghi-r.1   107919016   agamous-like MADS-box protein AGL12 
 gma-u.5   100815314   agamous-like MADS-box protein AGL12 
 gma-u.5   100783345   agamous-like MADS-box protein AGL12-like protein 
 mtr-u.5   25491856   agamous-like MADS-box protein AGL12 
 sly-u.5   544256   TAGL12 transcription factor 
 sot-r.1   102599417   agamous-like MADS-box protein AGL12 
 nta-r.1   107772110   agamous-like MADS-box protein AGL12 
 nta-r.1   107832036   agamous-like MADS-box protein AGL12 
 osa-u.5   4344493   MADS-box transcription factor 26-like 
 zma-u.5   100282492   MADS-box transcription factor 26 
 zma-u.5   103628959   MADS-box transcription factor 26 
 tae-r.2   123189307   MADS-box transcription factor 26 
 tae-r.2   123053398   MADS-box transcription factor 26 
 tae-r.2   123045555   MADS-box transcription factor 26-like 
 hvu-r.1   123426807   MADS-box transcription factor 26-like 
 hvu-r.1   123409312   MADS-box transcription factor 26 
 sbi-r.1   8075852   MADS-box transcription factor 26 
 sbi-r.1   8066077   MADS-box transcription factor 26 
 bdi-r.1   100829055   MADS-box transcription factor 26-like 
 bdi-r.1   100835552   MADS-box transcription factor 26-like 

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Top 50 coexpressed genes to 103830841 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103830841 (bra-r.6 coexpression data)

CoexMap"103830841"


braLOC103830841 | Entrez gene ID : 103830841    
Species bra bna ath ghi gma mtr sly sot nta osa zma tae hvu sbi bdi cre ppo vvi cit
Paralog 3 3 1 2 2 1 1 1 2 1 2 3 2 2 2 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (248 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (391 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (478 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (727 genes)  IEA  
Protein XP_009104908.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 2,  chlo 1,  mito_plas 1  (predict for XP_009104908.1)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for XP_009104908.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103830841
bra-r.6
for
103852713
bra-r.6
for
103831676
bna-r.1
for
106414354
bna-r.1
for
106397842
bna-r.1
for
106381088
ath-u.5
for
AGL12
ghi-r.1
for
107952051
ghi-r.1
for
107919016
gma-u.5
for
100815314
gma-u.5
for
100783345
mtr-u.5
for
25491856
sly-u.5
for
544256
sot-r.1
for
102599417
nta-r.1
for
107772110
nta-r.1
for
107832036
osa-u.5
for
4344493
zma-u.5
for
100282492
zma-u.5
for
103628959
tae-r.2
for
123189307
tae-r.2
for
123053398
tae-r.2
for
123045555
hvu-r.1
for
123426807
hvu-r.1
for
123409312
sbi-r.1
for
8075852
sbi-r.1
for
8066077
bdi-r.1
for
100829055
bdi-r.1
for
100835552


Ortholog ID: 4158
Species bra bra bra bna bna bna ath ghi ghi gma gma mtr sly sot nta nta osa zma zma tae tae hvu hvu sbi sbi bdi
Symbol LOC103830841 LOC103852713 LOC103831676 LOC106414354 LOC106381088 LOC106345490 AGL12 LOC107952051 LOC107919016 LOC100815314 LOC100783345 LOC25491856 LOC544256 LOC102599417 LOC107772110 LOC107832036 LOC4344493 LOC100282492 LOC103628959 LOC123189307 LOC100136962 LOC123426807 LOC123409312 LOC8075852 LOC8066077 LOC100829055
Function* agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 AGAMOUS-like 12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12-like protein agamous-like MADS-box protein AGL12 TAGL12 transcription factor agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 agamous-like MADS-box protein AGL12 MADS-box transcription factor 26-like MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26-like MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26 MADS-box transcription factor 26-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00750 Vitamin B6 metabolism 3
gma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 6
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
tae01230 Biosynthesis of amino acids 2
tae00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
bdi00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103830841 103852713 103831676 106414354 106381088 106345490 843497 107952051 107919016 100815314 100783345 25491856 544256 102599417 107772110 107832036 4344493 100282492 103628959 123189307 100136962 123426807 123409312 8075852 8066077 100829055
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