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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4   18098561   pentatricopeptide repeat-containing protein At3g62890 
 ppo-u.5   18098561   pentatricopeptide repeat-containing protein At3g62890 
 gma-u.5   100789149   pentatricopeptide repeat-containing protein At3g62890 
 mtr-u.5   25488960   pentatricopeptide repeat-containing protein At3g62890 
 cit-r.1   102631336   pentatricopeptide repeat-containing protein At3g62890-like 
 sly-u.5   101248527   pentatricopeptide repeat-containing protein At3g62890-like 
 sot-r.1   102581387   pentatricopeptide repeat-containing protein At3g62890-like 
 nta-r.1   107778983   pentatricopeptide repeat-containing protein At3g62890-like 
 nta-r.1   107805918   pentatricopeptide repeat-containing protein At3g62890-like 
 osa-u.5   4332647   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 zma-u.5   100382149   Pentatricopeptide repeat-containing protein mitochondrial 
 tae-r.2   123097649   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 tae-r.2   123092311   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 tae-r.2   123085693   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 hvu-r.1   123448797   pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 
 bdi-r.1   100826482   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 

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Top 50 coexpressed genes to 18098561 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18098561 (ppo-r.4 coexpression data)

CoexMap"18098561"


ppoLOC18098561 | Entrez gene ID : 18098561    
Species ppo gma mtr cit sly sot nta osa zma tae hvu bdi cre vvi bra ath bna ghi sbi
Paralog 2 1 1 1 1 1 2 1 1 3 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_006382364.2 [sequence] [blastp]
XP_024456108.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  plas 1,  E.R. 1,  E.R._plas 1,  mito_plas 1  (predict for XP_006382364.2)
chlo 8,  mito 1,  plas 1,  E.R. 1,  E.R._plas 1,  mito_plas 1  (predict for XP_024456108.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_006382364.2)
mito 3  (predict for XP_024456108.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-r.4
for
18098561
ppo-u.5
for
18098561
gma-u.5
for
100789149
mtr-u.5
for
25488960
cit-r.1
for
102631336
sly-u.5
for
101248527
sot-r.1
for
102581387
nta-r.1
for
107778983
nta-r.1
for
107805918
osa-u.5
for
4332647
zma-u.5
for
100382149
tae-r.2
for
123097649
tae-r.2
for
123092311
tae-r.2
for
123085693
hvu-r.1
for
123448797
bdi-r.1
for
100826482


Ortholog ID: 13263
Species ppo gma mtr cit sly sot nta nta osa zma tae tae tae hvu bdi
Symbol LOC18098561 LOC100789149 LOC25488960 LOC102631336 LOC101248527 LOC102581387 LOC107778983 LOC107805918 LOC4332647 LOC100382149 LOC123097649 LOC123092311 LOC123085693 LOC123448797 LOC100826482
Function* pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At3g62890-like pentatricopeptide repeat-containing protein At3g62890-like pentatricopeptide repeat-containing protein At3g62890-like pentatricopeptide repeat-containing protein At3g62890-like pentatricopeptide repeat-containing protein At3g62890-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18098561 100789149 25488960 102631336 101248527 102581387 107778983 107805918 4332647 100382149 123097649 123092311 123085693 123448797 100826482
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