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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123085693   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 tae-r.2   123097649   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 tae-r.2   123092311   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 hvu-r.1   123448797   pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 
 bdi-r.1   100826482   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 osa-u.5   4332647   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 zma-u.5   100382149   Pentatricopeptide repeat-containing protein mitochondrial 
 gma-u.5   100789149   pentatricopeptide repeat-containing protein At3g62890 
 sly-u.5   101248527   pentatricopeptide repeat-containing protein At3g62890-like 
 ppo-u.5   18098561   pentatricopeptide repeat-containing protein At3g62890 
 mtr-u.5   25488960   pentatricopeptide repeat-containing protein At3g62890 
 sot-r.1   102581387   pentatricopeptide repeat-containing protein At3g62890-like 
 cit-r.1   102631336   pentatricopeptide repeat-containing protein At3g62890-like 
 nta-r.1   107778983   pentatricopeptide repeat-containing protein At3g62890-like 
 nta-r.1   107805918   pentatricopeptide repeat-containing protein At3g62890-like 

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Top 50 coexpressed genes to 123085693 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123085693 (tae-r.2 coexpression data)

CoexMap"123085693"


taeLOC123085693 | Entrez gene ID : 123085693    
Species tae hvu bdi osa zma gma sly ppo mtr sot cit nta bra cre ghi sbi ath bna vvi
Paralog 3 1 1 1 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044363313.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 1  (predict for XP_044363313.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_044363313.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123085693
tae-r.2
for
123097649
tae-r.2
for
123092311
hvu-r.1
for
123448797
bdi-r.1
for
100826482
osa-u.5
for
4332647
zma-u.5
for
100382149
gma-u.5
for
100789149
sly-u.5
for
101248527
ppo-u.5
for
18098561
mtr-u.5
for
25488960
sot-r.1
for
102581387
cit-r.1
for
102631336
nta-r.1
for
107778983
nta-r.1
for
107805918


Ortholog ID: 13263
Species tae tae tae hvu bdi osa zma gma sly ppo mtr sot cit nta nta
Symbol LOC123085693 LOC123097649 LOC123092311 LOC123448797 LOC100826482 LOC4332647 LOC100382149 LOC100789149 LOC101248527 LOC18098561 LOC25488960 LOC102581387 LOC102631336 LOC107778983 LOC107805918
Function* pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At3g62890-like pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At3g62890-like pentatricopeptide repeat-containing protein At3g62890-like pentatricopeptide repeat-containing protein At3g62890-like pentatricopeptide repeat-containing protein At3g62890-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123085693 123097649 123092311 123448797 100826482 4332647 100382149 100789149 101248527 18098561 25488960 102581387 102631336 107778983 107805918
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