Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4   7456003   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 ppo-u.5   7456003   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 ppo-m.4   7456003   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 gma-u.5   100792776   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 mtr-u.5   11427821   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 ath-u.5   AT4G26680   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1   107945139   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 ghi-r.1   121215968   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 bna-r.1   106444953   pentatricopeptide repeat-containing protein At4g26680, mitochondrial-like 
 bna-r.1   106428303   pentatricopeptide repeat-containing protein At4g26680, mitochondrial-like 
 cit-r.1   102630405   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 sly-u.5   101257876   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 sot-r.1   102588537   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 nta-r.1   107769823   uncharacterized LOC107769823 
 nta-r.1   107797133   uncharacterized LOC107797133 

close


Top 50 coexpressed genes to 7456003 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7456003 (ppo-r.4 coexpression data)

CoexMap"7456003"


ppoLOC7456003 | Entrez gene ID : 7456003    
Species ppo gma mtr ath ghi bna cit sly sot nta cre vvi bra hvu tae bdi osa zma sbi
Paralog 3 1 1 1 2 2 1 1 1 2 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024440140.1 [sequence] [blastp]
XP_024440141.1 [sequence] [blastp]
XP_024440143.1 [sequence] [blastp]
XP_052303241.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  chlo 3,  nucl 3,  cyto_mito 2  (predict for XP_024440140.1)
mito 3,  chlo 3,  nucl 3,  cyto_mito 2  (predict for XP_024440141.1)
mito 3,  chlo 3,  nucl 3,  cyto_mito 2  (predict for XP_024440143.1)
mito 5,  cyto_mito 3,  chlo 1,  plas 1,  nucl 1,  cyto 1,  cyto_nucl 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1  (predict for XP_052303241.1)
Subcellular
localization
TargetP
mito 7,  other 4  (predict for XP_024440140.1)
mito 7,  other 4  (predict for XP_024440141.1)
mito 7,  other 4  (predict for XP_024440143.1)
mito 7,  other 4  (predict for XP_052303241.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-r.4
for
7456003
ppo-u.5
for
7456003
ppo-m.4
for
7456003
gma-u.5
for
100792776
mtr-u.5
for
11427821
ath-u.5
for
AT4G26680
ghi-r.1
for
107945139
ghi-r.1
for
121215968
bna-r.1
for
106444953
bna-r.1
for
106428303
cit-r.1
for
102630405
sly-u.5
for
101257876
sot-r.1
for
102588537
nta-r.1
for
107769823
nta-r.1
for
107797133


Ortholog ID: 13449
Species ppo gma mtr ath ghi ghi bna bna cit sly sot nta nta
Symbol LOC7456003 LOC100792776 LOC11427821 AT4G26680 LOC107945139 LOC121215968 LOC106444953 LOC106428303 LOC102630405 LOC101257876 LOC102588537 LOC107769823 LOC107797133
Function* pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial-like pentatricopeptide repeat-containing protein At4g26680, mitochondrial-like pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial uncharacterized LOC107769823 uncharacterized LOC107797133
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7456003 100792776 11427821 828775 107945139 121215968 106444953 106428303 102630405 101257876 102588537 107769823 107797133
The preparation time of this page was 0.1 [sec].