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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7456003   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 ppo-r.4   7456003   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 ppo-m.4   7456003   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 gma-u.5   100792776   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 mtr-u.5   11427821   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 ath-u.5   AT4G26680   Tetratricopeptide repeat (TPR)-like superfamily protein 
 sly-u.5   101257876   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 

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Top 50 coexpressed genes to 7456003 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7456003 (ppo-u.5 coexpression data)

CoexMap"7456003"


ppoLOC7456003 | Entrez gene ID : 7456003    
Species ppo gma mtr ath sly sbi nta bra osa cre cit vvi hvu bdi sot zma tae bna ghi
Paralog 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024440140.1 [sequence] [blastp]
XP_024440141.1 [sequence] [blastp]
XP_024440143.1 [sequence] [blastp]
XP_052303241.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  chlo 3,  nucl 3,  cyto_mito 2  (predict for XP_024440140.1)
mito 3,  chlo 3,  nucl 3,  cyto_mito 2  (predict for XP_024440141.1)
mito 3,  chlo 3,  nucl 3,  cyto_mito 2  (predict for XP_024440143.1)
mito 5,  cyto_mito 3,  chlo 1,  plas 1,  nucl 1,  cyto 1,  cyto_nucl 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1  (predict for XP_052303241.1)
Subcellular
localization
TargetP
mito 7,  other 4  (predict for XP_024440140.1)
mito 7,  other 4  (predict for XP_024440141.1)
mito 7,  other 4  (predict for XP_024440143.1)
mito 7,  other 4  (predict for XP_052303241.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7456003

.
ppo-r.4
for
7456003

.
ppo-m.4
for
7456003

.
gma-u.5
for
100792776

.
mtr-u.5
for
11427821

.
ath-u.5
for
AT4G26680

.
sly-u.5
for
101257876

.


Ortholog ID: 13449
Species ath gma sly ppo mtr ghi ghi bna bna sot cit nta nta
Symbol AT4G26680 LOC100792776 LOC101257876 LOC7456003 LOC11427821 LOC107945139 LOC121215968 LOC106428303 LOC106444953 LOC102588537 LOC102630405 LOC107797133 LOC107769823
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial-like pentatricopeptide repeat-containing protein At4g26680, mitochondrial-like pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial uncharacterized LOC107797133 uncharacterized LOC107769823
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828775 100792776 101257876 7456003 11427821 107945139 121215968 106428303 106444953 102588537 102630405 107797133 107769823
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