Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106428303   pentatricopeptide repeat-containing protein At4g26680, mitochondrial-like 
 bna-r.1   106444953   pentatricopeptide repeat-containing protein At4g26680, mitochondrial-like 
 ath-u.5   AT4G26680   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1   107945139   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 ghi-r.1   121215968   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 cit-r.1   102630405   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 gma-u.5   100792776   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 ppo-u.5   7456003   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 mtr-u.5   11427821   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 sly-u.5   101257876   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 sot-r.1   102588537   pentatricopeptide repeat-containing protein At4g26680, mitochondrial 
 nta-r.1   107769823   uncharacterized LOC107769823 
 nta-r.1   107797133   uncharacterized LOC107797133 

close


Top 50 coexpressed genes to 106428303 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 106428303 (bna-r.1 coexpression data)

CoexMap"106428303"


bnaLOC106428303 | Entrez gene ID : 106428303    
Species bna ath ghi cit gma ppo mtr sly sot nta bra zma cre sbi tae osa hvu vvi bdi
Paralog 2 1 2 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_022550515.2 [sequence] [blastp]
XP_048600222.1 [sequence] [blastp]
XP_048600223.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  cyto_mito 4,  chlo 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_022550515.2)
mito 5,  cyto_mito 3,  chlo 3,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_048600222.1)
mito 6,  cyto_mito 4,  chlo 3  (predict for XP_048600223.1)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_022550515.2)
mito 7,  chlo 3  (predict for XP_048600222.1)
mito 7,  chlo 3  (predict for XP_048600223.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106428303
bna-r.1
for
106444953
ath-u.5
for
AT4G26680
ghi-r.1
for
107945139
ghi-r.1
for
121215968
cit-r.1
for
102630405
gma-u.5
for
100792776
ppo-u.5
for
7456003
mtr-u.5
for
11427821
sly-u.5
for
101257876
sot-r.1
for
102588537
nta-r.1
for
107769823
nta-r.1
for
107797133


Ortholog ID: 13449
Species bna bna ath ghi ghi cit gma ppo mtr sly sot nta nta
Symbol LOC106428303 LOC106444953 AT4G26680 LOC107945139 LOC121215968 LOC102630405 LOC100792776 LOC7456003 LOC11427821 LOC101257876 LOC102588537 LOC107769823 LOC107797133
Function* pentatricopeptide repeat-containing protein At4g26680, mitochondrial-like pentatricopeptide repeat-containing protein At4g26680, mitochondrial-like Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial pentatricopeptide repeat-containing protein At4g26680, mitochondrial uncharacterized LOC107769823 uncharacterized LOC107797133
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106428303 106444953 828775 107945139 121215968 102630405 100792776 7456003 11427821 101257876 102588537 107769823 107797133
The preparation time of this page was 0.1 [sec].