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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7459076   putative pentatricopeptide repeat-containing protein At2g02150 
 ppo-r.4   7459076   putative pentatricopeptide repeat-containing protein At2g02150 
 ppo-m.4   7459076   putative pentatricopeptide repeat-containing protein At2g02150 
 gma-u.5   100786756   putative pentatricopeptide repeat-containing protein At2g02150 
 mtr-u.5   120577626   putative pentatricopeptide repeat-containing protein At2g02150 
 ath-u.5   EMB2794   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103827529   putative pentatricopeptide repeat-containing protein At2g02150 
 vvi-u.5   100241074   putative pentatricopeptide repeat-containing protein At2g02150 
 ghi-r.1   107946298   putative pentatricopeptide repeat-containing protein At2g02150 
 ghi-r.1   107918111   putative pentatricopeptide repeat-containing protein At2g02150 
 bna-r.1   106451699   putative pentatricopeptide repeat-containing protein At2g02150 
 bna-r.1   106369354   putative pentatricopeptide repeat-containing protein At2g02150 
 cit-r.1   127899432   putative pentatricopeptide repeat-containing protein At2g02150 
 sly-u.5   101244724   pentatricopeptide repeat-containing protein 
 nta-r.1   107793694   uncharacterized LOC107793694 
 nta-r.1   107771998   uncharacterized LOC107771998 

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Top 50 coexpressed genes to 7459076 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7459076 (ppo-u.5 coexpression data)

CoexMap"7459076"


ppoLOC7459076 | Entrez gene ID : 7459076    
Species ppo gma mtr ath bra vvi ghi bna cit sly nta sbi cre tae zma osa sot bdi hvu
Paralog 3 1 1 1 1 1 2 2 1 1 2 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002315826.4 [sequence] [blastp]
XP_024465415.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  mito 4  (predict for XP_002315826.4)
chlo 4,  chlo_mito 4,  mito 4  (predict for XP_024465415.2)
Subcellular
localization
TargetP
chlo 5  (predict for XP_002315826.4)
chlo 5  (predict for XP_024465415.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7459076
ppo-r.4
for
7459076
ppo-m.4
for
7459076
gma-u.5
for
100786756
mtr-u.5
for
120577626
ath-u.5
for
EMB2794
bra-r.6
for
103827529
vvi-u.5
for
100241074
ghi-r.1
for
107946298
ghi-r.1
for
107918111
bna-r.1
for
106451699
bna-r.1
for
106369354
cit-r.1
for
127899432
sly-u.5
for
101244724
nta-r.1
for
107793694
nta-r.1
for
107771998


Ortholog ID: 13415
Species ppo gma mtr ath bra vvi ghi ghi bna bna cit sly nta nta
Symbol LOC7459076 LOC100786756 LOC120577626 EMB2794 LOC103827529 LOC100241074 LOC107946298 LOC107918111 LOC106451699 LOC106369354 LOC127899432 LOC101244724 LOC107793694 LOC107771998
Function* putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 pentatricopeptide repeat-containing protein uncharacterized LOC107793694 uncharacterized LOC107771998
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7459076 100786756 120577626 814746 103827529 100241074 107946298 107918111 106451699 106369354 127899432 101244724 107793694 107771998
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