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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100786756   putative pentatricopeptide repeat-containing protein At2g02150 
 gma-r.7   100786756   putative pentatricopeptide repeat-containing protein At2g02150 
 gma-m.5   100786756   putative pentatricopeptide repeat-containing protein At2g02150 
 mtr-u.5   120577626   putative pentatricopeptide repeat-containing protein At2g02150 
 ppo-u.5   7459076   putative pentatricopeptide repeat-containing protein At2g02150 
 ath-u.5   EMB2794   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100241074   putative pentatricopeptide repeat-containing protein At2g02150 
 sly-u.5   101244724   pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 100786756 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100786756 (gma-u.5 coexpression data)

CoexMap"100786756"


gmaLOC100786756 | Entrez gene ID : 100786756      
Species gma mtr ppo ath vvi sly hvu osa sot tae nta bra cit ghi zma bna bdi sbi cre
Paralog 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006585050.1 [sequence] [blastp]
XP_006585051.1 [sequence] [blastp]
XP_006585054.1 [sequence] [blastp]
XP_006585055.1 [sequence] [blastp]
XP_014634267.1 [sequence] [blastp]
XP_014634270.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_006585050.1)
chlo 6,  mito 4  (predict for XP_006585051.1)
chlo 6,  mito 4  (predict for XP_006585054.1)
chlo 6,  mito 4  (predict for XP_006585055.1)
chlo 6,  mito 4  (predict for XP_014634267.1)
chlo 6,  mito 4  (predict for XP_014634270.1)
Subcellular
localization
TargetP
chlo 7,  mito 6  (predict for XP_006585050.1)
chlo 7,  mito 6  (predict for XP_006585051.1)
chlo 7,  mito 6  (predict for XP_006585054.1)
chlo 7,  mito 6  (predict for XP_006585055.1)
chlo 7,  mito 6  (predict for XP_014634267.1)
chlo 7,  mito 6  (predict for XP_014634270.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100786756

.
gma-r.7
for
100786756

.
gma-m.5
for
100786756

.
mtr-u.5
for
120577626

.
ppo-u.5
for
7459076

.
ath-u.5
for
EMB2794

.
vvi-u.5
for
100241074

.
sly-u.5
for
101244724

.


Ortholog ID: 13415
Species ath gma sly bra vvi ppo mtr ghi ghi bna bna cit nta nta
Symbol EMB2794 LOC100786756 LOC101244724 LOC103827529 LOC100241074 LOC7459076 LOC120577626 LOC107918111 LOC107946298 LOC106369354 LOC106451699 LOC127899432 LOC107793694 LOC107771998
Function* Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At2g02150 pentatricopeptide repeat-containing protein putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 uncharacterized LOC107793694 uncharacterized LOC107771998
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814746 100786756 101244724 103827529 100241074 7459076 120577626 107918111 107946298 106369354 106451699 127899432 107793694 107771998
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