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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7464006   uncharacterized LOC7464006 
 ppo-r.4   7464006   uncharacterized LOC7464006 
 gma-u.5   100794821   RNA-binding protein 28 
 gma-u.5   100791823   RNA-binding protein 28 
 mtr-u.5   11426394   RNA-binding protein 28 
 ath-u.5   AT2G21440   RNA-binding (RRM/RBD/RNP motifs) family protein 
 bra-r.6   103842525   RNA-binding protein 28 
 vvi-u.5   100257200   uncharacterized LOC100257200 
 ghi-r.1   107913544   RNA-binding protein 28 
 ghi-r.1   107920290   RNA-binding protein 28 
 bna-r.1   106446365   RNA-binding protein 28 
 bna-r.1   106415323   RNA-binding protein 28-like 
 cit-r.1   102622608   uncharacterized LOC102622608 
 sly-u.5   101263645   uncharacterized LOC101263645 
 sot-r.1   102594402   RNA-binding protein 28 
 nta-r.1   107828288   uncharacterized LOC107828288 
 nta-r.1   107822442   uncharacterized LOC107822442 
 osa-u.5   4334461   RNA-binding protein 28 
 osa-u.5   4334625   uncharacterized LOC4334625 
 zma-u.5   103625805   RNA-binding protein 28 
 tae-r.2   123123267   RNA-binding protein 28 
 tae-r.2   123105484   RNA-binding protein 28 
 hvu-r.1   123452788   RNA-binding protein 28 
 sbi-r.1   8081230   RNA-binding protein 28 
 bdi-r.1   100829322   RNA-binding protein 28 
 cre-r.1   CHLRE_02g104650v5   uncharacterized protein 

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Top 50 coexpressed genes to 7464006 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7464006 (ppo-u.5 coexpression data)

CoexMap"7464006"


ppoLOC7464006 | Entrez gene ID : 7464006    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 1 1 1 1 2 2 1 1 1 2 2 1 2 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03008 [list] [network] Ribosome biogenesis in eukaryotes (334 genes)
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_024464650.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_024464650.2)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for XP_024464650.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7464006
ppo-r.4
for
7464006
gma-u.5
for
100794821
gma-u.5
for
100791823
mtr-u.5
for
11426394
ath-u.5
for
AT2G21440
bra-r.6
for
103842525
vvi-u.5
for
100257200
ghi-r.1
for
107913544
ghi-r.1
for
107920290
bna-r.1
for
106446365
bna-r.1
for
106415323
cit-r.1
for
102622608
sly-u.5
for
101263645
sot-r.1
for
102594402
nta-r.1
for
107828288
nta-r.1
for
107822442
osa-u.5
for
4334461
osa-u.5
for
4334625
zma-u.5
for
103625805
tae-r.2
for
123123267
tae-r.2
for
123105484
hvu-r.1
for
123452788
sbi-r.1
for
8081230
bdi-r.1
for
100829322
cre-r.1
for
CHLRE_02g104650v5


Ortholog ID: 8394
Species ppo gma gma mtr ath bra vvi ghi ghi bna bna cit sly sot nta nta osa osa zma tae tae hvu sbi bdi cre
Symbol LOC7464006 LOC100794821 LOC100791823 LOC11426394 AT2G21440 LOC103842525 LOC100257200 LOC107913544 LOC107920290 LOC106446365 LOC106365982 LOC102622608 LOC101263645 LOC102594402 LOC107828288 LOC107822442 LOC4334461 LOC4334625 LOC103625805 LOC123123267 LOC123105484 LOC123452788 LOC8081230 LOC100829322 CHLRE_02g104650v5
Function* uncharacterized LOC7464006 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding protein 28 uncharacterized LOC100257200 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 uncharacterized LOC102622608 uncharacterized LOC101263645 RNA-binding protein 28 uncharacterized LOC107828288 uncharacterized LOC107822442 RNA-binding protein 28 uncharacterized LOC4334625 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03040 Spliceosome 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
tae03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7464006 100794821 100791823 11426394 816683 103842525 100257200 107913544 107920290 106446365 106365982 102622608 101263645 102594402 107828288 107822442 4334461 4334625 103625805 123123267 123105484 123452788 8081230 100829322 5725537
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