Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100257200   uncharacterized LOC100257200 
 vvi-r.5   100257200   uncharacterized LOC100257200 
 vvi-m.5   100257200   uncharacterized LOC100257200 
 ath-u.5   AT2G21440   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100794821   RNA-binding protein 28 
 gma-u.5   100791823   RNA-binding protein 28 
 ppo-u.5   7464006   uncharacterized LOC7464006 
 mtr-u.5   11426394   RNA-binding protein 28 
 sly-u.5   101263645   uncharacterized LOC101263645 
 osa-u.5   4334461   RNA-binding protein 28 
 osa-u.5   4334625   uncharacterized LOC4334625 
 zma-u.5   103625805   RNA-binding protein 28 

close


Top 50 coexpressed genes to 100257200 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100257200 (vvi-u.5 coexpression data)

CoexMap"100257200"


vviLOC100257200 | Entrez gene ID : 100257200      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 2 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi03008 [list] [network] Ribosome biogenesis in eukaryotes (287 genes)
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
Protein XP_010647688.1 [sequence] [blastp]
XP_010647689.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for XP_010647688.1)
nucl 9,  cyto 1  (predict for XP_010647689.1)
Subcellular
localization
TargetP
other 7  (predict for XP_010647688.1)
other 7  (predict for XP_010647689.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100257200
vvi-r.5
for
100257200
vvi-m.5
for
100257200
ath-u.5
for
AT2G21440
gma-u.5
for
100794821
gma-u.5
for
100791823
ppo-u.5
for
7464006
mtr-u.5
for
11426394
sly-u.5
for
101263645
osa-u.5
for
4334461
osa-u.5
for
4334625
zma-u.5
for
103625805


Ortholog ID: 8394
Species vvi ath gma gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa osa zma tae tae hvu sbi bdi cre
Symbol LOC100257200 AT2G21440 LOC100791823 LOC100794821 LOC103842525 LOC7464006 LOC11426394 LOC107913544 LOC107920290 LOC106446365 LOC106365982 LOC102622608 LOC101263645 LOC102594402 LOC107828288 LOC107822442 LOC4334625 LOC4334461 LOC103625805 LOC123123267 LOC123105484 LOC123452788 LOC8081230 LOC100829322 CHLRE_02g104650v5
Function* uncharacterized LOC100257200 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 uncharacterized LOC7464006 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 uncharacterized LOC102622608 uncharacterized LOC101263645 RNA-binding protein 28 uncharacterized LOC107828288 uncharacterized LOC107822442 uncharacterized LOC4334625 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 RNA-binding protein 28 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03040 Spliceosome 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
tae03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100257200 816683 100791823 100794821 103842525 7464006 11426394 107913544 107920290 106446365 106365982 102622608 101263645 102594402 107828288 107822442 4334625 4334461 103625805 123123267 123105484 123452788 8081230 100829322 5725537
The preparation time of this page was 0.1 [sec].