ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7469077	uncharacterized LOC7469077
ppo-r.4	7469077	uncharacterized LOC7469077
ppo-u.5	18102352	uncharacterized LOC18102352
gma-u.5	100819759	uncharacterized LOC100819759
gma-u.5	100816406	uncharacterized LOC100816406
gma-u.5	100816385	uncharacterized LOC100816385
mtr-u.5	11414964	uncharacterized protein C12G12.07c
ath-u.5	AT1G27090	glycine-rich protein
bra-r.6	103835629	uncharacterized LOC103835629
vvi-u.5	100248339	uncharacterized LOC100248339
ghi-r.1	107959957	uncharacterized LOC107959957
ghi-r.1	107948066	uncharacterized LOC107948066
ghi-r.1	107903864	uncharacterized LOC107903864
bna-r.1	106399218	uncharacterized LOC106399218
bna-r.1	BNAC05G19640D	uncharacterized BNAC05G19640D
bna-r.1	BNAC08G20270D	uncharacterized BNAC08G20270D
cit-r.1	102619416	uncharacterized LOC102619416
sly-u.5	101253779	uncharacterized protein C12G12.07c
sly-u.5	101255911	uncharacterized protein C12G12.07c
sot-r.1	102594597	uncharacterized LOC102594597
sot-r.1	102597833	uncharacterized LOC102597833
nta-r.1	107786080	uncharacterized LOC107786080
nta-r.1	107794145	uncharacterized LOC107794145
nta-r.1	107794871	uncharacterized LOC107794871
osa-u.5	4333766	uncharacterized LOC4333766
zma-u.5	100382297	uncharacterized LOC100382297
zma-u.5	100382366	uncharacterized LOC100382366
tae-r.2	123095724	heterogeneous nuclear ribonucleoprotein A2 homolog 1
tae-r.2	123090708	nuclear transport factor 2
tae-r.2	123087246	polyadenylation factor subunit 2
hvu-r.1	123409849	uncharacterized LOC123409849
sbi-r.1	8054151	uncharacterized LOC8054151
bdi-r.1	100834871	uncharacterized LOC100834871

Top 50 coexpressed genes to 7469077 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7469077 (ppo-u.5 coexpression data)

CoexMap"7469077"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002312704.3 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto 1, mito 1, pero 1, cyto_pero 1

(predict for XP_002312704.3)

Subcellular
localization
TargetP

other 7, chlo 3

(predict for XP_002312704.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7469077	ppo-r.4 for 7469077	ppo-u.5 for 18102352	gma-u.5 for 100819759	gma-u.5 for 100816406	gma-u.5 for 100816385	mtr-u.5 for 11414964	ath-u.5 for AT1G27090	bra-r.6 for 103835629	vvi-u.5 for 100248339	ghi-r.1 for 107959957	ghi-r.1 for 107948066	ghi-r.1 for 107903864	bna-r.1 for 106399218	bna-r.1 for BNAC05G19640D	bna-r.1 for BNAC08G20270D	cit-r.1 for 102619416	sly-u.5 for 101253779	sly-u.5 for 101255911	sot-r.1 for 102594597	sot-r.1 for 102597833	nta-r.1 for 107786080	nta-r.1 for 107794145	nta-r.1 for 107794871	osa-u.5 for 4333766	zma-u.5 for 100382297	zma-u.5 for 100382366	tae-r.2 for 123095724	tae-r.2 for 123090708	tae-r.2 for 123087246	hvu-r.1 for 123409849	sbi-r.1 for 8054151	bdi-r.1 for 100834871

Ortholog

Ortholog ID: 4826

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC7469077

uncharacterized LOC18102352

uncharacterized LOC100819759

uncharacterized LOC100816406

uncharacterized LOC100816385

uncharacterized protein C12G12.07c

glycine-rich protein

uncharacterized LOC103835629

uncharacterized LOC100248339

uncharacterized LOC107959957

uncharacterized LOC107948066

uncharacterized LOC107903864

uncharacterized LOC106399218

uncharacterized BNAC08G20270D

uncharacterized LOC106436755

uncharacterized LOC102619416

uncharacterized protein C12G12.07c

uncharacterized LOC102594597

uncharacterized LOC102597833

uncharacterized LOC107786080

uncharacterized LOC107794871

uncharacterized LOC107797108

uncharacterized LOC4333766

uncharacterized LOC100382297

uncharacterized LOC100382366

heterogeneous nuclear ribonucleoprotein A2 homolog 1

nuclear transport factor 2

polyadenylation factor subunit 2

nuclear transport factor 2

uncharacterized LOC8054151

uncharacterized LOC100834871

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	3
ppo03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2
gma00230	Purine metabolism	2
gma01232	Nucleotide metabolism	2
gma00300	Lysine biosynthesis	2
gma00470	D-Amino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	6
mtr03018	RNA degradation	2
mtr03082	ATP-dependent chromatin remodeling	2
mtr03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	3
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2
bra03050	Proteasome	2
bra00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi00220	Arginine biosynthesis	3
ghi01210	2-Oxocarboxylic acid metabolism	3
ghi01230	Biosynthesis of amino acids	3
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi00220	Arginine biosynthesis	3
ghi01210	2-Oxocarboxylic acid metabolism	3
ghi01230	Biosynthesis of amino acids	3
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi03008	Ribosome biogenesis in eukaryotes	2
ghi03018	RNA degradation	2
ghi03083	Polycomb repressive complex	2
ghi00220	Arginine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	2
sly03015	mRNA surveillance pathway	2
sly04814	Motor proteins	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	5
sly03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4
sot03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	3
nta03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	10
nta00480	Glutathione metabolism	2
nta03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	7
sbi03013	Nucleocytoplasmic transport	2
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	2
bdi04141	Protein processing in endoplasmic reticulum	2
bdi03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

7469077

18102352

100819759

100816406

100816385

11414964

839598

103835629

100248339

107959957

107948066

107903864

106399218

106361947

106436755

102619416

101253779

101255911

102594597

102597833

107786080

107794871

107797108

4333766

100382297

100382366

123095724

123090708

123087246

123447187

8054151

100834871

The preparation time of this page was 0.2 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	3	1	1	1	1	3	3	1	2	2	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7469077 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7469077 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**