ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106399218	uncharacterized LOC106399218
bna-r.1	BNAC08G20270D	uncharacterized BNAC08G20270D
bna-r.1	BNAC05G19640D	uncharacterized BNAC05G19640D
bna-r.1	106436755	uncharacterized LOC106436755
bra-r.6	103835629	uncharacterized LOC103835629
ath-u.5	AT1G27090	glycine-rich protein
ghi-r.1	107948066	uncharacterized LOC107948066
ghi-r.1	107959957	uncharacterized LOC107959957
ghi-r.1	107899611	uncharacterized LOC107899611
cit-r.1	102619416	uncharacterized LOC102619416
gma-u.5	100816385	uncharacterized LOC100816385
gma-u.5	100779117	uncharacterized LOC100779117
gma-u.5	100819759	uncharacterized LOC100819759
vvi-u.5	100248339	uncharacterized LOC100248339
ppo-u.5	18102352	uncharacterized LOC18102352
ppo-u.5	7469077	uncharacterized LOC7469077
mtr-u.5	11414964	uncharacterized protein C12G12.07c
sly-u.5	101255911	uncharacterized protein C12G12.07c
sly-u.5	101253779	uncharacterized protein C12G12.07c
sot-r.1	102594597	uncharacterized LOC102594597
sot-r.1	102597833	uncharacterized LOC102597833
nta-r.1	107786080	uncharacterized LOC107786080
nta-r.1	107797108	uncharacterized LOC107797108
nta-r.1	107794145	uncharacterized LOC107794145
osa-u.5	4333766	uncharacterized LOC4333766
zma-u.5	100382297	uncharacterized LOC100382297
zma-u.5	100382366	uncharacterized LOC100382366
tae-r.2	123087246	polyadenylation factor subunit 2
tae-r.2	123090708	nuclear transport factor 2
tae-r.2	123095724	heterogeneous nuclear ribonucleoprotein A2 homolog 1
hvu-r.1	123409849	uncharacterized LOC123409849
sbi-r.1	8054151	uncharacterized LOC8054151
bdi-r.1	100834871	uncharacterized LOC100834871

Top 50 coexpressed genes to 106399218 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106399218 (bna-r.1 coexpression data)

CoexMap"106399218"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_013695147.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, chlo 1, cyto 1, plas 1, cyto_plas 1

(predict for XP_013695147.2)

Subcellular
localization
TargetP

chlo 8, other 3

(predict for XP_013695147.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106399218	bna-r.1 for BNAC08G20270D	bna-r.1 for BNAC05G19640D	bna-r.1 for 106436755	bra-r.6 for 103835629	ath-u.5 for AT1G27090	ghi-r.1 for 107948066	ghi-r.1 for 107959957	ghi-r.1 for 107899611	cit-r.1 for 102619416	gma-u.5 for 100816385	gma-u.5 for 100779117	gma-u.5 for 100819759	vvi-u.5 for 100248339	ppo-u.5 for 18102352	ppo-u.5 for 7469077	mtr-u.5 for 11414964	sly-u.5 for 101255911	sly-u.5 for 101253779	sot-r.1 for 102594597	sot-r.1 for 102597833	nta-r.1 for 107786080	nta-r.1 for 107797108	nta-r.1 for 107794145	osa-u.5 for 4333766	zma-u.5 for 100382297	zma-u.5 for 100382366	tae-r.2 for 123087246	tae-r.2 for 123090708	tae-r.2 for 123095724	hvu-r.1 for 123409849	sbi-r.1 for 8054151	bdi-r.1 for 100834871

Ortholog

Ortholog ID: 4826

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC106399218

uncharacterized BNAC08G20270D

uncharacterized LOC106436755

uncharacterized LOC103835629

glycine-rich protein

uncharacterized LOC107948066

uncharacterized LOC107959957

uncharacterized LOC107903864

uncharacterized LOC102619416

uncharacterized LOC100816385

uncharacterized LOC100819759

uncharacterized LOC100816406

uncharacterized LOC100248339

uncharacterized LOC18102352

uncharacterized LOC7469077

uncharacterized protein C12G12.07c

uncharacterized LOC102594597

uncharacterized LOC102597833

uncharacterized LOC107786080

uncharacterized LOC107797108

uncharacterized LOC107794871

uncharacterized LOC4333766

uncharacterized LOC100382297

uncharacterized LOC100382366

polyadenylation factor subunit 2

nuclear transport factor 2

heterogeneous nuclear ribonucleoprotein A2 homolog 1

nuclear transport factor 2

uncharacterized LOC8054151

uncharacterized LOC100834871

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2
bra03050	Proteasome	2
bra00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	3
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi00220	Arginine biosynthesis	3
ghi01210	2-Oxocarboxylic acid metabolism	3
ghi01230	Biosynthesis of amino acids	3
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi00220	Arginine biosynthesis	3
ghi01210	2-Oxocarboxylic acid metabolism	3
ghi01230	Biosynthesis of amino acids	3
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi03008	Ribosome biogenesis in eukaryotes	2
ghi03018	RNA degradation	2
ghi03083	Polycomb repressive complex	2
ghi00220	Arginine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2
gma00230	Purine metabolism	2
gma01232	Nucleotide metabolism	2
gma00300	Lysine biosynthesis	2
gma00470	D-Amino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	3
ppo03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	6
mtr03018	RNA degradation	2
mtr03082	ATP-dependent chromatin remodeling	2
mtr03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	5
sly03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	2
sly03015	mRNA surveillance pathway	2
sly04814	Motor proteins	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4
sot03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	10
nta00480	Glutathione metabolism	2
nta03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	3
nta03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	7
sbi03013	Nucleocytoplasmic transport	2
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	2
bdi04141	Protein processing in endoplasmic reticulum	2
bdi03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

106399218

106361947

106436755

103835629

839598

107948066

107959957

107903864

102619416

100816385

100819759

100816406

100248339

18102352

7469077

11414964

101255911

101253779

102594597

102597833

107786080

107797108

107794871

4333766

100382297

100382366

123087246

123090708

123095724

123447187

8054151

100834871

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	1	3	1	3	1	2	1	2	2	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106399218 (bna-r.1 coexpression data)

Top 50 enrichment test to 106399218 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**